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Small and Simple, yet Sturdy: Conformationally Constrained Peptides with Remarkable Properties
The sheer size and vast chemical space (i.e., diverse repertoire and spatial distribution of functional groups) underlie peptides’ ability to engage in specific interactions with targets of various structures. However, the inherent flexibility of the peptide chain negatively affects binding affinity...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7915549/ https://www.ncbi.nlm.nih.gov/pubmed/33562633 http://dx.doi.org/10.3390/ijms22041611 |
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author | Bozovičar, Krištof Bratkovič, Tomaž |
author_facet | Bozovičar, Krištof Bratkovič, Tomaž |
author_sort | Bozovičar, Krištof |
collection | PubMed |
description | The sheer size and vast chemical space (i.e., diverse repertoire and spatial distribution of functional groups) underlie peptides’ ability to engage in specific interactions with targets of various structures. However, the inherent flexibility of the peptide chain negatively affects binding affinity and metabolic stability, thereby severely limiting the use of peptides as medicines. Imposing conformational constraints to the peptide chain offers to solve these problems but typically requires laborious structure optimization. Alternatively, libraries of constrained peptides with randomized modules can be screened for specific functions. Here, we present the properties of conformationally constrained peptides and review rigidification chemistries/strategies, as well as synthetic and enzymatic methods of producing macrocyclic peptides. Furthermore, we discuss the in vitro molecular evolution methods for the development of constrained peptides with pre-defined functions. Finally, we briefly present applications of selected constrained peptides to illustrate their exceptional properties as drug candidates, molecular recognition probes, and minimalist catalysts. |
format | Online Article Text |
id | pubmed-7915549 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-79155492021-03-01 Small and Simple, yet Sturdy: Conformationally Constrained Peptides with Remarkable Properties Bozovičar, Krištof Bratkovič, Tomaž Int J Mol Sci Review The sheer size and vast chemical space (i.e., diverse repertoire and spatial distribution of functional groups) underlie peptides’ ability to engage in specific interactions with targets of various structures. However, the inherent flexibility of the peptide chain negatively affects binding affinity and metabolic stability, thereby severely limiting the use of peptides as medicines. Imposing conformational constraints to the peptide chain offers to solve these problems but typically requires laborious structure optimization. Alternatively, libraries of constrained peptides with randomized modules can be screened for specific functions. Here, we present the properties of conformationally constrained peptides and review rigidification chemistries/strategies, as well as synthetic and enzymatic methods of producing macrocyclic peptides. Furthermore, we discuss the in vitro molecular evolution methods for the development of constrained peptides with pre-defined functions. Finally, we briefly present applications of selected constrained peptides to illustrate their exceptional properties as drug candidates, molecular recognition probes, and minimalist catalysts. MDPI 2021-02-05 /pmc/articles/PMC7915549/ /pubmed/33562633 http://dx.doi.org/10.3390/ijms22041611 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Bozovičar, Krištof Bratkovič, Tomaž Small and Simple, yet Sturdy: Conformationally Constrained Peptides with Remarkable Properties |
title | Small and Simple, yet Sturdy: Conformationally Constrained Peptides with Remarkable Properties |
title_full | Small and Simple, yet Sturdy: Conformationally Constrained Peptides with Remarkable Properties |
title_fullStr | Small and Simple, yet Sturdy: Conformationally Constrained Peptides with Remarkable Properties |
title_full_unstemmed | Small and Simple, yet Sturdy: Conformationally Constrained Peptides with Remarkable Properties |
title_short | Small and Simple, yet Sturdy: Conformationally Constrained Peptides with Remarkable Properties |
title_sort | small and simple, yet sturdy: conformationally constrained peptides with remarkable properties |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7915549/ https://www.ncbi.nlm.nih.gov/pubmed/33562633 http://dx.doi.org/10.3390/ijms22041611 |
work_keys_str_mv | AT bozovicarkristof smallandsimpleyetsturdyconformationallyconstrainedpeptideswithremarkableproperties AT bratkovictomaz smallandsimpleyetsturdyconformationallyconstrainedpeptideswithremarkableproperties |