Cargando…

Small and Simple, yet Sturdy: Conformationally Constrained Peptides with Remarkable Properties

The sheer size and vast chemical space (i.e., diverse repertoire and spatial distribution of functional groups) underlie peptides’ ability to engage in specific interactions with targets of various structures. However, the inherent flexibility of the peptide chain negatively affects binding affinity...

Descripción completa

Detalles Bibliográficos
Autores principales: Bozovičar, Krištof, Bratkovič, Tomaž
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7915549/
https://www.ncbi.nlm.nih.gov/pubmed/33562633
http://dx.doi.org/10.3390/ijms22041611
_version_ 1783657269040250880
author Bozovičar, Krištof
Bratkovič, Tomaž
author_facet Bozovičar, Krištof
Bratkovič, Tomaž
author_sort Bozovičar, Krištof
collection PubMed
description The sheer size and vast chemical space (i.e., diverse repertoire and spatial distribution of functional groups) underlie peptides’ ability to engage in specific interactions with targets of various structures. However, the inherent flexibility of the peptide chain negatively affects binding affinity and metabolic stability, thereby severely limiting the use of peptides as medicines. Imposing conformational constraints to the peptide chain offers to solve these problems but typically requires laborious structure optimization. Alternatively, libraries of constrained peptides with randomized modules can be screened for specific functions. Here, we present the properties of conformationally constrained peptides and review rigidification chemistries/strategies, as well as synthetic and enzymatic methods of producing macrocyclic peptides. Furthermore, we discuss the in vitro molecular evolution methods for the development of constrained peptides with pre-defined functions. Finally, we briefly present applications of selected constrained peptides to illustrate their exceptional properties as drug candidates, molecular recognition probes, and minimalist catalysts.
format Online
Article
Text
id pubmed-7915549
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-79155492021-03-01 Small and Simple, yet Sturdy: Conformationally Constrained Peptides with Remarkable Properties Bozovičar, Krištof Bratkovič, Tomaž Int J Mol Sci Review The sheer size and vast chemical space (i.e., diverse repertoire and spatial distribution of functional groups) underlie peptides’ ability to engage in specific interactions with targets of various structures. However, the inherent flexibility of the peptide chain negatively affects binding affinity and metabolic stability, thereby severely limiting the use of peptides as medicines. Imposing conformational constraints to the peptide chain offers to solve these problems but typically requires laborious structure optimization. Alternatively, libraries of constrained peptides with randomized modules can be screened for specific functions. Here, we present the properties of conformationally constrained peptides and review rigidification chemistries/strategies, as well as synthetic and enzymatic methods of producing macrocyclic peptides. Furthermore, we discuss the in vitro molecular evolution methods for the development of constrained peptides with pre-defined functions. Finally, we briefly present applications of selected constrained peptides to illustrate their exceptional properties as drug candidates, molecular recognition probes, and minimalist catalysts. MDPI 2021-02-05 /pmc/articles/PMC7915549/ /pubmed/33562633 http://dx.doi.org/10.3390/ijms22041611 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Bozovičar, Krištof
Bratkovič, Tomaž
Small and Simple, yet Sturdy: Conformationally Constrained Peptides with Remarkable Properties
title Small and Simple, yet Sturdy: Conformationally Constrained Peptides with Remarkable Properties
title_full Small and Simple, yet Sturdy: Conformationally Constrained Peptides with Remarkable Properties
title_fullStr Small and Simple, yet Sturdy: Conformationally Constrained Peptides with Remarkable Properties
title_full_unstemmed Small and Simple, yet Sturdy: Conformationally Constrained Peptides with Remarkable Properties
title_short Small and Simple, yet Sturdy: Conformationally Constrained Peptides with Remarkable Properties
title_sort small and simple, yet sturdy: conformationally constrained peptides with remarkable properties
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7915549/
https://www.ncbi.nlm.nih.gov/pubmed/33562633
http://dx.doi.org/10.3390/ijms22041611
work_keys_str_mv AT bozovicarkristof smallandsimpleyetsturdyconformationallyconstrainedpeptideswithremarkableproperties
AT bratkovictomaz smallandsimpleyetsturdyconformationallyconstrainedpeptideswithremarkableproperties