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gapseq: informed prediction of bacterial metabolic pathways and reconstruction of accurate metabolic models

Genome-scale metabolic models of microorganisms are powerful frameworks to predict phenotypes from an organism’s genotype. While manual reconstructions are laborious, automated reconstructions often fail to recapitulate known metabolic processes. Here we present gapseq (https://github.com/jotech/gap...

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Detalles Bibliográficos
Autores principales: Zimmermann, Johannes, Kaleta, Christoph, Waschina, Silvio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7949252/
https://www.ncbi.nlm.nih.gov/pubmed/33691770
http://dx.doi.org/10.1186/s13059-021-02295-1