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A Relationship between NTP and Cell Extract Concentration for Cell-Free Protein Expression

The cell-free protein synthesis (CFPS) that synthesizes mRNA and protein from a template DNA has been featured as an important tool to emulate living systems in vitro. However, an obstacle to emulate living cells by CFPS is the loss of activity in the case of usage of high concentration cell extract...

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Autores principales: Takahashi, Katsuki, Sato, Gaku, Doi, Nobuhide, Fujiwara, Kei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7999496/
https://www.ncbi.nlm.nih.gov/pubmed/33805612
http://dx.doi.org/10.3390/life11030237
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author Takahashi, Katsuki
Sato, Gaku
Doi, Nobuhide
Fujiwara, Kei
author_facet Takahashi, Katsuki
Sato, Gaku
Doi, Nobuhide
Fujiwara, Kei
author_sort Takahashi, Katsuki
collection PubMed
description The cell-free protein synthesis (CFPS) that synthesizes mRNA and protein from a template DNA has been featured as an important tool to emulate living systems in vitro. However, an obstacle to emulate living cells by CFPS is the loss of activity in the case of usage of high concentration cell extracts. In this study, we found that a high concentration of NTP which inhibits in the case of lower concentration cell extract restored the loss of CFPS activity using high concentration cell extracts. The NTP restoration was independent of the energy regeneration system used, and NTP derivatives also restored the levels of CFPS using a high concentration cell extract. Experiments using dialysis mode of CFPS showed that continuous exchange of small molecule reduced levels of NTP requirement and improved reaction speed of CFPS using the high concentration of cell extract. These findings contribute to the development of a method to understand the condition of living cells by in vitro emulation, and are expected to lead to the achievement of the reconstitution of living cells from biomolecule mixtures.
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spelling pubmed-79994962021-03-28 A Relationship between NTP and Cell Extract Concentration for Cell-Free Protein Expression Takahashi, Katsuki Sato, Gaku Doi, Nobuhide Fujiwara, Kei Life (Basel) Article The cell-free protein synthesis (CFPS) that synthesizes mRNA and protein from a template DNA has been featured as an important tool to emulate living systems in vitro. However, an obstacle to emulate living cells by CFPS is the loss of activity in the case of usage of high concentration cell extracts. In this study, we found that a high concentration of NTP which inhibits in the case of lower concentration cell extract restored the loss of CFPS activity using high concentration cell extracts. The NTP restoration was independent of the energy regeneration system used, and NTP derivatives also restored the levels of CFPS using a high concentration cell extract. Experiments using dialysis mode of CFPS showed that continuous exchange of small molecule reduced levels of NTP requirement and improved reaction speed of CFPS using the high concentration of cell extract. These findings contribute to the development of a method to understand the condition of living cells by in vitro emulation, and are expected to lead to the achievement of the reconstitution of living cells from biomolecule mixtures. MDPI 2021-03-13 /pmc/articles/PMC7999496/ /pubmed/33805612 http://dx.doi.org/10.3390/life11030237 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ).
spellingShingle Article
Takahashi, Katsuki
Sato, Gaku
Doi, Nobuhide
Fujiwara, Kei
A Relationship between NTP and Cell Extract Concentration for Cell-Free Protein Expression
title A Relationship between NTP and Cell Extract Concentration for Cell-Free Protein Expression
title_full A Relationship between NTP and Cell Extract Concentration for Cell-Free Protein Expression
title_fullStr A Relationship between NTP and Cell Extract Concentration for Cell-Free Protein Expression
title_full_unstemmed A Relationship between NTP and Cell Extract Concentration for Cell-Free Protein Expression
title_short A Relationship between NTP and Cell Extract Concentration for Cell-Free Protein Expression
title_sort relationship between ntp and cell extract concentration for cell-free protein expression
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7999496/
https://www.ncbi.nlm.nih.gov/pubmed/33805612
http://dx.doi.org/10.3390/life11030237
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