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Sparse Project VCF: efficient encoding of population genotype matrices
SUMMARY: Variant Call Format (VCF), the prevailing representation for germline genotypes in population sequencing, suffers rapid size growth as larger cohorts are sequenced and more rare variants are discovered. We present Sparse Project VCF (spVCF), an evolution of VCF with judicious entropy reduct...
Autores principales: | Lin, Michael F, Bai, Xiaodong, Salerno, William J, Reid, Jeffrey G |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8016461/ https://www.ncbi.nlm.nih.gov/pubmed/33300997 http://dx.doi.org/10.1093/bioinformatics/btaa1004 |
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