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New alignment-based sequence extraction software (ALiBaSeq) and its utility for deep level phylogenetics

Despite many bioinformatic solutions for analyzing sequencing data, few options exist for targeted sequence retrieval from whole genomic sequencing (WGS) data with the ultimate goal of generating a phylogeny. Available tools especially struggle at deep phylogenetic levels and necessitate amino-acid...

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Detalles Bibliográficos
Autores principales: Knyshov, Alexander, Gordon, Eric R.L., Weirauch, Christiane
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8019319/
https://www.ncbi.nlm.nih.gov/pubmed/33850647
http://dx.doi.org/10.7717/peerj.11019