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Understanding interactions between risk factors, and assessing the utility of the additive and multiplicative models through simulations

Understanding the genetic background of complex diseases requires the expansion of studies beyond univariate associations. Therefore, it is important to use interaction assessments of risk factors in order to discover whether, and how genetic risk variants act together on disease development. The pr...

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Autores principales: Diaz-Gallo, Lina-Marcela, Brynedal, Boel, Westerlind, Helga, Sandberg, Rickard, Ramsköld, Daniel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8075235/
https://www.ncbi.nlm.nih.gov/pubmed/33901204
http://dx.doi.org/10.1371/journal.pone.0250282
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author Diaz-Gallo, Lina-Marcela
Brynedal, Boel
Westerlind, Helga
Sandberg, Rickard
Ramsköld, Daniel
author_facet Diaz-Gallo, Lina-Marcela
Brynedal, Boel
Westerlind, Helga
Sandberg, Rickard
Ramsköld, Daniel
author_sort Diaz-Gallo, Lina-Marcela
collection PubMed
description Understanding the genetic background of complex diseases requires the expansion of studies beyond univariate associations. Therefore, it is important to use interaction assessments of risk factors in order to discover whether, and how genetic risk variants act together on disease development. The principle of interaction analysis is to explore the magnitude of the combined effect of risk factors on disease causation. In this study, we use simulations to investigate different scenarios of causation to show how the magnitude of the effect of two risk factors interact. We mainly focus on the two most commonly used interaction models, the additive and multiplicative risk scales, since there is often confusion regarding their use and interpretation. Our results show that the combined effect is multiplicative when two risk factors are involved in the same chain of events, an interaction called synergism. Synergism is often described as a deviation from additivity, which is a broader term. Our results also confirm that it is often relevant to estimate additive effect relationships, because they correspond to independent risk factors at low disease prevalence. Importantly, we evaluate the threshold of more than two required risk factors for disease causation, called the multifactorial threshold model. We found a simple mathematical relationship (square root) between the threshold and an additive-to-multiplicative linear effect scale (AMLES), where 0 corresponds to an additive effect and 1 to a multiplicative. We propose AMLES as a metric that could be used to test different effects relationships at the same time, given that it can simultaneously reveal additive, multiplicative and intermediate risk effects relationships. Finally, the utility of our simulation study was demonstrated using real data by analyzing and interpreting gene-gene interaction odds ratios from a rheumatoid arthritis case-control cohort.
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spelling pubmed-80752352021-05-05 Understanding interactions between risk factors, and assessing the utility of the additive and multiplicative models through simulations Diaz-Gallo, Lina-Marcela Brynedal, Boel Westerlind, Helga Sandberg, Rickard Ramsköld, Daniel PLoS One Research Article Understanding the genetic background of complex diseases requires the expansion of studies beyond univariate associations. Therefore, it is important to use interaction assessments of risk factors in order to discover whether, and how genetic risk variants act together on disease development. The principle of interaction analysis is to explore the magnitude of the combined effect of risk factors on disease causation. In this study, we use simulations to investigate different scenarios of causation to show how the magnitude of the effect of two risk factors interact. We mainly focus on the two most commonly used interaction models, the additive and multiplicative risk scales, since there is often confusion regarding their use and interpretation. Our results show that the combined effect is multiplicative when two risk factors are involved in the same chain of events, an interaction called synergism. Synergism is often described as a deviation from additivity, which is a broader term. Our results also confirm that it is often relevant to estimate additive effect relationships, because they correspond to independent risk factors at low disease prevalence. Importantly, we evaluate the threshold of more than two required risk factors for disease causation, called the multifactorial threshold model. We found a simple mathematical relationship (square root) between the threshold and an additive-to-multiplicative linear effect scale (AMLES), where 0 corresponds to an additive effect and 1 to a multiplicative. We propose AMLES as a metric that could be used to test different effects relationships at the same time, given that it can simultaneously reveal additive, multiplicative and intermediate risk effects relationships. Finally, the utility of our simulation study was demonstrated using real data by analyzing and interpreting gene-gene interaction odds ratios from a rheumatoid arthritis case-control cohort. Public Library of Science 2021-04-26 /pmc/articles/PMC8075235/ /pubmed/33901204 http://dx.doi.org/10.1371/journal.pone.0250282 Text en © 2021 Diaz-Gallo et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Diaz-Gallo, Lina-Marcela
Brynedal, Boel
Westerlind, Helga
Sandberg, Rickard
Ramsköld, Daniel
Understanding interactions between risk factors, and assessing the utility of the additive and multiplicative models through simulations
title Understanding interactions between risk factors, and assessing the utility of the additive and multiplicative models through simulations
title_full Understanding interactions between risk factors, and assessing the utility of the additive and multiplicative models through simulations
title_fullStr Understanding interactions between risk factors, and assessing the utility of the additive and multiplicative models through simulations
title_full_unstemmed Understanding interactions between risk factors, and assessing the utility of the additive and multiplicative models through simulations
title_short Understanding interactions between risk factors, and assessing the utility of the additive and multiplicative models through simulations
title_sort understanding interactions between risk factors, and assessing the utility of the additive and multiplicative models through simulations
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8075235/
https://www.ncbi.nlm.nih.gov/pubmed/33901204
http://dx.doi.org/10.1371/journal.pone.0250282
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