Cargando…

A Chemical Acetylation-Based Mass Spectrometry Platform for Histone Methylation Profiling

Histones are highly posttranslationally modified proteins that regulate gene expression by modulating chromatin structure and function. Acetylation and methylation are the most abundant histone modifications, with methylation occurring on lysine (mono-, di-, and trimethylation) and arginine (mono- a...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zappacosta, Francesca, Wagner, Craig D., Della Pietra, Anthony, Gerhart, Sarah V., Keenan, Kathryn, Korenchuck, Susan, Quinn, Chad J., Barbash, Olena, McCabe, Michael T., Annan, Roland S.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	American Society for Biochemistry and Molecular Biology 2021
Materias:	Technological Innovation and Resources
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8138768/ https://www.ncbi.nlm.nih.gov/pubmed/33775892 http://dx.doi.org/10.1016/j.mcpro.2021.100067

Ejemplares similares

Platform-independent and Label-free Quantitation of Proteomic Data Using MS1 Extracted Ion Chromatograms in Skyline: APPLICATION TO PROTEIN ACETYLATION AND PHOSPHORYLATION
por: Schilling, Birgit, et al.
Publicado: (2012)

Optimization of Experimental Parameters in Data-Independent Mass Spectrometry Significantly Increases Depth and Reproducibility of Results
por: Bruderer, Roland, et al.
Publicado: (2017)

Proteome-wide Analysis of Lysine Acetylation Suggests its Broad Regulatory Scope in Saccharomyces cerevisiae
por: Henriksen, Peter, et al.
Publicado: (2012)

Immunoaffinity Enrichment and Mass Spectrometry Analysis of Protein Methylation
por: Guo, Ailan, et al.
Publicado: (2014)

Proteomic Analysis and Discovery Using Affinity Proteomics and Mass Spectrometry
por: Olsson, Niclas, et al.
Publicado: (2011)

Quantifying Positional Isomers (QPI) by Top-Down Mass Spectrometry
por: Brunner, Andrea M., et al.
Publicado: (2021)

Evaluation and Refinement of Sample Preparation Methods for Extracellular Matrix Proteome Coverage
por: McCabe, Maxwell C., et al.
Publicado: (2021)

pyQms enables universal and accurate quantification of mass spectrometry data
por: Leufken, Johannes, et al.
Publicado: (2017)

Data-independent Acquisition Improves Quantitative Cross-linking Mass Spectrometry
por: Müller, Fränze, et al.
Publicado: (2019)

The mzIdentML Data Standard for Mass Spectrometry-Based Proteomics Results
por: Jones, Andrew R., et al.
Publicado: (2012)

Identification of Novel Kinases of Tau Using Fluorescence Complementation Mass Spectrometry (FCMS)
por: Kao, Der-Shyang, et al.
Publicado: (2022)

Trimethylacetic Anhydride–Based Derivatization Facilitates Quantification of Histone Marks at the MS1 Level
por: Kuchaříková, Hana, et al.
Publicado: (2021)

Isolation of Acetylated and Unmodified Protein N-Terminal Peptides by Strong Cation Exchange Chromatographic Separation of TrypN-Digested Peptides
por: Chang, Chih-Hsiang, et al.
Publicado: (2020)

Automated Label-free Quantification of Metabolites from Liquid Chromatography–Mass Spectrometry Data
por: Kenar, Erhan, et al.
Publicado: (2014)

MARMoSET – Extracting Publication-ready Mass Spectrometry Metadata from RAW Files
por: Kiweler, Marina, et al.
Publicado: (2019)

Mass Spectrometric Quantification of Histone Post-translational Modifications by a Hybrid Chemical Labeling Method
por: Maile, Tobias M., et al.
Publicado: (2015)

Extensive Mass Spectrometry-based Analysis of the Fission Yeast Proteome: THE SCHIZOSACCHAROMYCES POMBE PeptideAtlas*
por: Gunaratne, Jayantha, et al.
Publicado: (2013)

Quantitative Cross-linking/Mass Spectrometry Using Isotope-labeled Cross-linkers and MaxQuant
por: Chen, Zhuo A., et al.
Publicado: (2016)

Prediction of Protein Complexes in Trypanosoma brucei by Protein Correlation Profiling Mass Spectrometry and Machine Learning
por: Crozier, Thomas W. M., et al.
Publicado: (2017)

MsImpute: Estimation of Missing Peptide Intensity Data in Label-Free Quantitative Mass Spectrometry
por: Hediyeh-Zadeh, Soroor, et al.
Publicado: (2023)

A High Through-put Platform for Recombinant Antibodies to Folded Proteins
por: Hornsby, Michael, et al.
Publicado: (2015)

In Vivo Analysis of Proteomes and Interactomes Using Parallel Affinity Capture (iPAC) Coupled to Mass Spectrometry
por: Rees, Johanna S., et al.
Publicado: (2011)

Sensitive Quantitative Proteomics of Human Hematopoietic Stem and Progenitor Cells by Data-independent Acquisition Mass Spectrometry
por: Amon, Sabine, et al.
Publicado: (2019)

AlphaTims: Indexing Trapped Ion Mobility Spectrometry–TOF Data for Fast and Easy Accession and Visualization
por: Willems, Sander, et al.
Publicado: (2021)

The mzQuantML Data Standard for Mass Spectrometry–based Quantitative Studies in Proteomics([Image: see text])
por: Walzer, Mathias, et al.
Publicado: (2013)

Probabilistic Segmentation of Mass Spectrometry (MS) Images Helps Select Important Ions and Characterize Confidence in the Resulting Segments
por: Bemis, Kyle D., et al.
Publicado: (2016)

DeMix Workflow for Efficient Identification of Cofragmented Peptides in High Resolution Data-dependent Tandem Mass Spectrometry
por: Zhang, Bo, et al.
Publicado: (2014)

Global Membrane Protein Interactome Analysis using In vivo Crosslinking and Mass Spectrometry-based Protein Correlation Profiling
por: Larance, Mark, et al.
Publicado: (2016)

Sensitive and Quantitative Detection of MHC-I Displayed Neoepitopes Using a Semiautomated Workflow and TOMAHAQ Mass Spectrometry
por: Pollock, Samuel B., et al.
Publicado: (2021)

inSPIRE: An Open-Source Tool for Increased Mass Spectrometry Identification Rates Using Prosit Spectral Prediction
por: Cormican, John A., et al.
Publicado: (2022)

Mass Spectrometry-based Proteomics Using Q Exactive, a High-performance Benchtop Quadrupole Orbitrap Mass Spectrometer
por: Michalski, Annette, et al.
Publicado: (2011)

Matrix Assisted Ionization Vacuum (MAIV), a New Ionization Method for Biological Materials Analysis Using Mass Spectrometry
por: Inutan, Ellen D., et al.
Publicado: (2013)

The Importance of Non-accessible Crosslinks and Solvent Accessible Surface Distance in Modeling Proteins with Restraints From Crosslinking Mass Spectrometry
por: Bullock, Joshua Matthew Allen, et al.
Publicado: (2016)

Fast and Accurate Bacterial Species Identification in Urine Specimens Using LC-MS/MS Mass Spectrometry and Machine Learning
por: Roux-Dalvai, Florence, et al.
Publicado: (2019)

Sensitive, High-Throughput HLA-I and HLA-II Immunopeptidomics Using Parallel Accumulation-Serial Fragmentation Mass Spectrometry
por: Phulphagar, Kshiti Meera, et al.
Publicado: (2023)

The mzTab Data Exchange Format: Communicating Mass-spectrometry-based Proteomics and Metabolomics Experimental Results to a Wider Audience
por: Griss, Johannes, et al.
Publicado: (2014)

Targeted Peptide Measurements in Biology and Medicine: Best Practices for Mass Spectrometry-based Assay Development Using a Fit-for-Purpose Approach
por: Carr, Steven A., et al.
Publicado: (2014)

A Double-Barrel Liquid Chromatography-Tandem Mass Spectrometry (LC-MS/MS) System to Quantify 96 Interactomes per Day
por: Hosp, Fabian, et al.
Publicado: (2015)

HTT-OMNI: A Web-based Platform for Huntingtin Interaction Exploration and Multi-omics Data Integration
por: Kennedy, Michelle A., et al.
Publicado: (2022)

pepDESC: A Method for the Detection of Differentially Expressed Proteins for Mass Spectrometry-Based Single-Cell Proteomics Using Peptide-level Information
por: Zhang, Yutong
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_137iktnch16uldpcvqjg5ve6k1