Cargando…

Predicting MHC I restricted T cell epitopes in mice with NAP-CNB, a novel online tool

Lack of a dedicated integrated pipeline for neoantigen discovery in mice hinders cancer immunotherapy research. Novel sequential approaches through recurrent neural networks can improve the accuracy of T-cell epitope binding affinity predictions in mice, and a simplified variant selection process ca...

Descripción completa

Detalles Bibliográficos
Autores principales:	Wert-Carvajal, Carlos, Sánchez-García, Rubén, Macías, José R, Sanz-Pamplona, Rebeca, Pérez, Almudena Méndez, Alemany, Ramon, Veiga, Esteban, Sorzano, Carlos Óscar S., Muñoz-Barrutia, Arrate
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2021
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8144223/ https://www.ncbi.nlm.nih.gov/pubmed/34031450 http://dx.doi.org/10.1038/s41598-021-89927-5

Ejemplares similares

Epitopes associated with MHC restriction site of T cells. III. I-J epitope on MHC-restricted T helper cells
Publicado: (1987)

FNAC Versus CNB: Who Wins the Match in Breast Lesions?
por: Chakrabarti, Indranil
Publicado: (2018)

CNB-001 reduces paraplegia in rabbits following spinal cord ischemia
por: Lapchak, Paul A., et al.
Publicado: (2019)

rhCNB Improves Cyclophosphamide-Induced Immunodeficiency in BALB/c Mice
por: Zhong, Wenhua, et al.
Publicado: (2022)

Efficient Blind Spectral Unmixing of Fluorescently Labeled Samples Using Multi-Layer Non-Negative Matrix Factorization
por: Pengo, Thomas, et al.
Publicado: (2013)

Characterization of Antigenic MHC-Class-I-Restricted T Cell Epitopes in the Glycoprotein of Ebolavirus
por: Powlson, Jonathan, et al.
Publicado: (2019)

3DBionotes COVID-19 edition
por: Macias, Jose Ramon, et al.
Publicado: (2021)

A combination of epitope prediction and molecular docking allows for good identification of MHC class I restricted T-cell epitopes
por: Zhang, Xue Wu
Publicado: (2013)

CNB-001 a Novel Curcumin Derivative, Guards Dopamine Neurons in MPTP Model of Parkinson's Disease
por: Jayaraj, Richard L., et al.
Publicado: (2014)

The genetically engineered drug rhCNB induces apoptosis via a mitochondrial route in tumor cells
por: Yang, Yang, et al.
Publicado: (2017)

Epitopes associated with the MHC restriction site of T cells. II. Somatic generation of Iat epitopes on T cells in radiation bone marrow chimeras
Publicado: (1987)

Predicting MHC class I epitopes in large datasets
por: Roomp, Kirsten, et al.
Publicado: (2010)

Structural Properties of MHC Class II Ligands, Implications for the Prediction of MHC Class II Epitopes
por: Jørgensen, Kasper Winther, et al.
Publicado: (2010)

Quantification of Lung Damage in an Elastase-Induced Mouse Model of Emphysema
por: Muñoz-Barrutia, Arrate, et al.
Publicado: (2012)

Identification of Cryptic MHC I–restricted Epitopes Encoded by HIV-1 Alternative Reading Frames
por: Cardinaud, Sylvain, et al.
Publicado: (2004)

Folding of Matrix Metalloproteinase-2 Prevents Endogenous Generation of MHC Class-I Restricted Epitope
por: Renaud, Virginie, et al.
Publicado: (2010)

Identification of minimal human MHC-restricted CD8+ T-cell epitopes within the Plasmodium falciparum circumsporozoite protein (CSP)
por: Sedegah, Martha, et al.
Publicado: (2013)

Discrepancies between radiological and histological findings in preoperative core needle (CNB) and vacuum-assisted (VAB) breast biopsies
por: Jörg, Inna, et al.
Publicado: (2020)

Caught Napping
Publicado: (1897)

Identification and localization of minimal MHC-restricted CD8+ T cell epitopes within the Plasmodium falciparum AMA1 protein
por: Sedegah, Martha, et al.
Publicado: (2010)

A Human Multi-Epitope Recombinant Vaccinia Virus as a Universal T Cell Vaccine Candidate against Influenza Virus
por: Goodman, Alan G., et al.
Publicado: (2011)

Stable Deep Neural Network Architectures for Mitochondria Segmentation on Electron Microscopy Volumes
por: Franco-Barranco, Daniel, et al.
Publicado: (2021)

To Nap or Not to Nap? A Systematic Review Evaluating Napping Behavior in Athletes and the Impact on Various Measures of Athletic Performance
por: Lastella, Michele, et al.
Publicado: (2021)

Experimental Validation of Multi-Epitope Peptides Including Promising MHC Class I- and II-Restricted Epitopes of Four Known Leishmania infantum Proteins
por: Agallou, Maria, et al.
Publicado: (2014)

Benchmarking predictions of MHC class I restricted T cell epitopes in a comprehensively studied model system
por: Paul, Sinu, et al.
Publicado: (2020)

Heart-specific Deletion of CnB1 Reveals Multiple Mechanisms Whereby Calcineurin Regulates Cardiac Growth and Function
por: Maillet, Marjorie, et al.
Publicado: (2010)

Selected research articles from the 2017 International Workshop on Computational Network Biology: Modeling, Analysis, and Control (CNB-MAC)
por: Yoon, Byung-Jun, et al.
Publicado: (2018)

Selected research articles from the 2018 International Workshop on Computational Network Biology: Modeling, Analysis, and Control (CNB-MAC)
por: Yoon, Byung-Jun, et al.
Publicado: (2019)

Selected research articles from the 2016 International Workshop on Computational Network Biology: Modeling, Analysis, and Control (CNB-MAC)
por: Yoon, Byung-Jun, et al.
Publicado: (2017)

Selected Research Articles from the 2019 International Workshop on Computational Network Biology: Modeling, Analysis, and Control (CNB-MAC)
por: Yoon, Byung-Jun, et al.
Publicado: (2020)

Major complications following central neuraxial block – A multi-centre observational study in Maharashtra (MGMM CNB Study)
por: Kulkarni, Sadhana S., et al.
Publicado: (2023)

NNAlign_MA; MHC Peptidome Deconvolution for Accurate MHC Binding Motif Characterization and Improved T-cell Epitope Predictions
por: Alvarez, Bruno, et al.
Publicado: (2019)

The impact of frequent napping and nap practice on sleep-dependent memory in humans
por: McDevitt, Elizabeth A., et al.
Publicado: (2018)

ABANICCO: A New Color Space for Multi-Label Pixel Classification and Color Analysis
por: Nicolás-Sáenz, Laura, et al.
Publicado: (2023)

Napping Reverses Increased Pain Sensitivity Due to Sleep Restriction
por: Faraut, Brice, et al.
Publicado: (2015)

SARS-CoV-2 mutations in MHC-I-restricted epitopes evade CD8(+) T cell responses
por: Agerer, Benedikt, et al.
Publicado: (2021)

In silico and in vitro arboviral MHC class I-restricted-epitope signatures reveal immunodominance and poor overlapping patterns
por: Lopes-Ribeiro, Ágata, et al.
Publicado: (2022)

Tumor cells fail to present MHC-II–restricted epitopes derived from oncogenes to CD4(+) T cells
por: Brightman, Spencer E., et al.
Publicado: (2023)

NAPS Quality Controls
Publicado: (1985)

NAPS : Quality Controls
Publicado: (1985)

Cannot write session to /tmp/vufind_sessions/sess_ol8l3fps60s77ekf33mbjh1jtd