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Increasing protein stability by engineering the n → π* interaction at the β-turn
Abundant n → π* interactions between adjacent backbone carbonyl groups, identified by statistical analysis of protein structures, are predicted to play an important role in dictating the structure of proteins. However, experimentally testing the prediction in proteins has been challenging due to the...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8161691/ https://www.ncbi.nlm.nih.gov/pubmed/34094214 http://dx.doi.org/10.1039/d0sc03060k |
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author | Khatri, Bhavesh Majumder, Puja Nagesh, Jayashree Penmatsa, Aravind Chatterjee, Jayanta |
author_facet | Khatri, Bhavesh Majumder, Puja Nagesh, Jayashree Penmatsa, Aravind Chatterjee, Jayanta |
author_sort | Khatri, Bhavesh |
collection | PubMed |
description | Abundant n → π* interactions between adjacent backbone carbonyl groups, identified by statistical analysis of protein structures, are predicted to play an important role in dictating the structure of proteins. However, experimentally testing the prediction in proteins has been challenging due to the weak nature of this interaction. By amplifying the strength of the n → π* interaction via amino acid substitution and thioamide incorporation at a solvent exposed β-turn within the GB1 proteins and Pin 1 WW domain, we demonstrate that an n → π* interaction increases the structural stability of proteins by restricting the ϕ torsion angle. Our results also suggest that amino acid side-chain identity and its rotameric conformation play an important and decisive role in dictating the strength of an n → π* interaction. |
format | Online Article Text |
id | pubmed-8161691 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-81616912021-06-04 Increasing protein stability by engineering the n → π* interaction at the β-turn Khatri, Bhavesh Majumder, Puja Nagesh, Jayashree Penmatsa, Aravind Chatterjee, Jayanta Chem Sci Chemistry Abundant n → π* interactions between adjacent backbone carbonyl groups, identified by statistical analysis of protein structures, are predicted to play an important role in dictating the structure of proteins. However, experimentally testing the prediction in proteins has been challenging due to the weak nature of this interaction. By amplifying the strength of the n → π* interaction via amino acid substitution and thioamide incorporation at a solvent exposed β-turn within the GB1 proteins and Pin 1 WW domain, we demonstrate that an n → π* interaction increases the structural stability of proteins by restricting the ϕ torsion angle. Our results also suggest that amino acid side-chain identity and its rotameric conformation play an important and decisive role in dictating the strength of an n → π* interaction. The Royal Society of Chemistry 2020-07-30 /pmc/articles/PMC8161691/ /pubmed/34094214 http://dx.doi.org/10.1039/d0sc03060k Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/ |
spellingShingle | Chemistry Khatri, Bhavesh Majumder, Puja Nagesh, Jayashree Penmatsa, Aravind Chatterjee, Jayanta Increasing protein stability by engineering the n → π* interaction at the β-turn |
title | Increasing protein stability by engineering the n → π* interaction at the β-turn |
title_full | Increasing protein stability by engineering the n → π* interaction at the β-turn |
title_fullStr | Increasing protein stability by engineering the n → π* interaction at the β-turn |
title_full_unstemmed | Increasing protein stability by engineering the n → π* interaction at the β-turn |
title_short | Increasing protein stability by engineering the n → π* interaction at the β-turn |
title_sort | increasing protein stability by engineering the n → π* interaction at the β-turn |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8161691/ https://www.ncbi.nlm.nih.gov/pubmed/34094214 http://dx.doi.org/10.1039/d0sc03060k |
work_keys_str_mv | AT khatribhavesh increasingproteinstabilitybyengineeringthenpinteractionatthebturn AT majumderpuja increasingproteinstabilitybyengineeringthenpinteractionatthebturn AT nageshjayashree increasingproteinstabilitybyengineeringthenpinteractionatthebturn AT penmatsaaravind increasingproteinstabilitybyengineeringthenpinteractionatthebturn AT chatterjeejayanta increasingproteinstabilitybyengineeringthenpinteractionatthebturn |