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Increasing protein stability by engineering the n → π* interaction at the β-turn

Abundant n → π* interactions between adjacent backbone carbonyl groups, identified by statistical analysis of protein structures, are predicted to play an important role in dictating the structure of proteins. However, experimentally testing the prediction in proteins has been challenging due to the...

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Autores principales: Khatri, Bhavesh, Majumder, Puja, Nagesh, Jayashree, Penmatsa, Aravind, Chatterjee, Jayanta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8161691/
https://www.ncbi.nlm.nih.gov/pubmed/34094214
http://dx.doi.org/10.1039/d0sc03060k
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author Khatri, Bhavesh
Majumder, Puja
Nagesh, Jayashree
Penmatsa, Aravind
Chatterjee, Jayanta
author_facet Khatri, Bhavesh
Majumder, Puja
Nagesh, Jayashree
Penmatsa, Aravind
Chatterjee, Jayanta
author_sort Khatri, Bhavesh
collection PubMed
description Abundant n → π* interactions between adjacent backbone carbonyl groups, identified by statistical analysis of protein structures, are predicted to play an important role in dictating the structure of proteins. However, experimentally testing the prediction in proteins has been challenging due to the weak nature of this interaction. By amplifying the strength of the n → π* interaction via amino acid substitution and thioamide incorporation at a solvent exposed β-turn within the GB1 proteins and Pin 1 WW domain, we demonstrate that an n → π* interaction increases the structural stability of proteins by restricting the ϕ torsion angle. Our results also suggest that amino acid side-chain identity and its rotameric conformation play an important and decisive role in dictating the strength of an n → π* interaction.
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spelling pubmed-81616912021-06-04 Increasing protein stability by engineering the n → π* interaction at the β-turn Khatri, Bhavesh Majumder, Puja Nagesh, Jayashree Penmatsa, Aravind Chatterjee, Jayanta Chem Sci Chemistry Abundant n → π* interactions between adjacent backbone carbonyl groups, identified by statistical analysis of protein structures, are predicted to play an important role in dictating the structure of proteins. However, experimentally testing the prediction in proteins has been challenging due to the weak nature of this interaction. By amplifying the strength of the n → π* interaction via amino acid substitution and thioamide incorporation at a solvent exposed β-turn within the GB1 proteins and Pin 1 WW domain, we demonstrate that an n → π* interaction increases the structural stability of proteins by restricting the ϕ torsion angle. Our results also suggest that amino acid side-chain identity and its rotameric conformation play an important and decisive role in dictating the strength of an n → π* interaction. The Royal Society of Chemistry 2020-07-30 /pmc/articles/PMC8161691/ /pubmed/34094214 http://dx.doi.org/10.1039/d0sc03060k Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/
spellingShingle Chemistry
Khatri, Bhavesh
Majumder, Puja
Nagesh, Jayashree
Penmatsa, Aravind
Chatterjee, Jayanta
Increasing protein stability by engineering the n → π* interaction at the β-turn
title Increasing protein stability by engineering the n → π* interaction at the β-turn
title_full Increasing protein stability by engineering the n → π* interaction at the β-turn
title_fullStr Increasing protein stability by engineering the n → π* interaction at the β-turn
title_full_unstemmed Increasing protein stability by engineering the n → π* interaction at the β-turn
title_short Increasing protein stability by engineering the n → π* interaction at the β-turn
title_sort increasing protein stability by engineering the n → π* interaction at the β-turn
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8161691/
https://www.ncbi.nlm.nih.gov/pubmed/34094214
http://dx.doi.org/10.1039/d0sc03060k
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