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Halcyon: an accurate basecaller exploiting an encoder–decoder model with monotonic attention

MOTIVATION: In recent years, nanopore sequencing technology has enabled inexpensive long-read sequencing, which promises reads longer than a few thousand bases. Such long-read sequences contribute to the precise detection of structural variations and accurate haplotype phasing. However, deciphering...

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Detalles Bibliográficos
Autores principales: Konishi, Hiroki, Yamaguchi, Rui, Yamaguchi, Kiyoshi, Furukawa, Yoichi, Imoto, Seiya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8189681/
https://www.ncbi.nlm.nih.gov/pubmed/33165508
http://dx.doi.org/10.1093/bioinformatics/btaa953