GUNC: detection of chimerism and contamination in prokaryotic genomes

Genomes are critical units in microbiology, yet ascertaining quality in prokaryotic genome assemblies remains a formidable challenge. We present GUNC (the Genome UNClutterer), a tool that accurately detects and quantifies genome chimerism based on the lineage homogeneity of individual contigs using...

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Detalles Bibliográficos
Autores principales: Orakov, Askarbek, Fullam, Anthony, Coelho, Luis Pedro, Khedkar, Supriya, Szklarczyk, Damian, Mende, Daniel R., Schmidt, Thomas S. B., Bork, Peer
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Method
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8201837/
https://www.ncbi.nlm.nih.gov/pubmed/34120611
http://dx.doi.org/10.1186/s13059-021-02393-0

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8201837/
https://www.ncbi.nlm.nih.gov/pubmed/34120611
http://dx.doi.org/10.1186/s13059-021-02393-0

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