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Beyond small molecules: targeting G-quadruplex structures with oligonucleotides and their analogues

G-Quadruplexes (G4s) are widely studied secondary DNA/RNA structures, naturally occurring when G-rich sequences are present. The strategic localization of G4s in genome areas of crucial importance, such as proto-oncogenes and telomeres, entails fundamental implications in terms of gene expression re...

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Autores principales: Cadoni, Enrico, De Paepe, Lessandro, Manicardi, Alex, Madder, Annemieke
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8266634/
https://www.ncbi.nlm.nih.gov/pubmed/33978760
http://dx.doi.org/10.1093/nar/gkab334
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author Cadoni, Enrico
De Paepe, Lessandro
Manicardi, Alex
Madder, Annemieke
author_facet Cadoni, Enrico
De Paepe, Lessandro
Manicardi, Alex
Madder, Annemieke
author_sort Cadoni, Enrico
collection PubMed
description G-Quadruplexes (G4s) are widely studied secondary DNA/RNA structures, naturally occurring when G-rich sequences are present. The strategic localization of G4s in genome areas of crucial importance, such as proto-oncogenes and telomeres, entails fundamental implications in terms of gene expression regulation and other important biological processes. Although thousands of small molecules capable to induce G4 stabilization have been reported over the past 20 years, approaches based on the hybridization of a synthetic probe, allowing sequence-specific G4-recognition and targeting are still rather limited. In this review, after introducing important general notions about G4s, we aim to list, explain and critically analyse in more detail the principal approaches available to target G4s by using oligonucleotides and synthetic analogues such as Locked Nucleic Acids (LNAs) and Peptide Nucleic Acids (PNAs), reporting on the most relevant examples described in literature to date.
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spelling pubmed-82666342021-07-09 Beyond small molecules: targeting G-quadruplex structures with oligonucleotides and their analogues Cadoni, Enrico De Paepe, Lessandro Manicardi, Alex Madder, Annemieke Nucleic Acids Res Survey and Summary G-Quadruplexes (G4s) are widely studied secondary DNA/RNA structures, naturally occurring when G-rich sequences are present. The strategic localization of G4s in genome areas of crucial importance, such as proto-oncogenes and telomeres, entails fundamental implications in terms of gene expression regulation and other important biological processes. Although thousands of small molecules capable to induce G4 stabilization have been reported over the past 20 years, approaches based on the hybridization of a synthetic probe, allowing sequence-specific G4-recognition and targeting are still rather limited. In this review, after introducing important general notions about G4s, we aim to list, explain and critically analyse in more detail the principal approaches available to target G4s by using oligonucleotides and synthetic analogues such as Locked Nucleic Acids (LNAs) and Peptide Nucleic Acids (PNAs), reporting on the most relevant examples described in literature to date. Oxford University Press 2021-05-12 /pmc/articles/PMC8266634/ /pubmed/33978760 http://dx.doi.org/10.1093/nar/gkab334 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Survey and Summary
Cadoni, Enrico
De Paepe, Lessandro
Manicardi, Alex
Madder, Annemieke
Beyond small molecules: targeting G-quadruplex structures with oligonucleotides and their analogues
title Beyond small molecules: targeting G-quadruplex structures with oligonucleotides and their analogues
title_full Beyond small molecules: targeting G-quadruplex structures with oligonucleotides and their analogues
title_fullStr Beyond small molecules: targeting G-quadruplex structures with oligonucleotides and their analogues
title_full_unstemmed Beyond small molecules: targeting G-quadruplex structures with oligonucleotides and their analogues
title_short Beyond small molecules: targeting G-quadruplex structures with oligonucleotides and their analogues
title_sort beyond small molecules: targeting g-quadruplex structures with oligonucleotides and their analogues
topic Survey and Summary
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8266634/
https://www.ncbi.nlm.nih.gov/pubmed/33978760
http://dx.doi.org/10.1093/nar/gkab334
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