HAVoC, a bioinformatic pipeline for reference-based consensus assembly and lineage assignment for SARS-CoV-2 sequences

BACKGROUND: SARS-CoV-2 related research has increased in importance worldwide since December 2019. Several new variants of SARS-CoV-2 have emerged globally, of which the most notable and concerning currently are the UK variant B.1.1.7, the South African variant B1.351 and the Brazilian variant P.1....

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Detalles Bibliográficos
Autores principales: Truong Nguyen, Phuoc Thien, Plyusnin, Ilya, Sironen, Tarja, Vapalahti, Olli, Kant, Ravi, Smura, Teemu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8285700/
https://www.ncbi.nlm.nih.gov/pubmed/34273961
http://dx.doi.org/10.1186/s12859-021-04294-2

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8285700/
https://www.ncbi.nlm.nih.gov/pubmed/34273961
http://dx.doi.org/10.1186/s12859-021-04294-2

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