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Local Mutations Can Serve as a Game Changer for Global Protein Solvent Interaction
[Image: see text] Although it is well-known that limited local mutations of enzymes, such as matrix metalloproteinases (MMPs), may change enzyme activity by orders of magnitude as well as its stability, the completely rational design of proteins is still challenging. These local changes alter the el...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American
Chemical Society
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8317155/ https://www.ncbi.nlm.nih.gov/pubmed/34337607 http://dx.doi.org/10.1021/jacsau.1c00155 |
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author | Adams, Ellen M. Pezzotti, Simone Ahlers, Jonas Rüttermann, Maximilian Levin, Maxim Goldenzweig, Adi Peleg, Yoav Fleishman, Sarel J. Sagi, Irit Havenith, Martina |
author_facet | Adams, Ellen M. Pezzotti, Simone Ahlers, Jonas Rüttermann, Maximilian Levin, Maxim Goldenzweig, Adi Peleg, Yoav Fleishman, Sarel J. Sagi, Irit Havenith, Martina |
author_sort | Adams, Ellen M. |
collection | PubMed |
description | [Image: see text] Although it is well-known that limited local mutations of enzymes, such as matrix metalloproteinases (MMPs), may change enzyme activity by orders of magnitude as well as its stability, the completely rational design of proteins is still challenging. These local changes alter the electrostatic potential and thus local electrostatic fields, which impacts the dynamics of water molecules close the protein surface. Here we show by a combined computational design, experimental, and molecular dynamics (MD) study that local mutations have not only a local but also a global effect on the solvent: In the specific case of the matrix metalloprotease MMP14, we found that the nature of local mutations, coupled with surface morphology, have the ability to influence large patches of the water hydrogen-bonding network at the protein surface, which is correlated with stability. The solvent contribution can be experimentally probed via terahertz (THz) spectroscopy, thus opening the door to the exciting perspective of rational protein design in which a systematic tuning of hydration water properties allows manipulation of protein stability and enzymatic activity. |
format | Online Article Text |
id | pubmed-8317155 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American
Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-83171552021-07-28 Local Mutations Can Serve as a Game Changer for Global Protein Solvent Interaction Adams, Ellen M. Pezzotti, Simone Ahlers, Jonas Rüttermann, Maximilian Levin, Maxim Goldenzweig, Adi Peleg, Yoav Fleishman, Sarel J. Sagi, Irit Havenith, Martina JACS Au [Image: see text] Although it is well-known that limited local mutations of enzymes, such as matrix metalloproteinases (MMPs), may change enzyme activity by orders of magnitude as well as its stability, the completely rational design of proteins is still challenging. These local changes alter the electrostatic potential and thus local electrostatic fields, which impacts the dynamics of water molecules close the protein surface. Here we show by a combined computational design, experimental, and molecular dynamics (MD) study that local mutations have not only a local but also a global effect on the solvent: In the specific case of the matrix metalloprotease MMP14, we found that the nature of local mutations, coupled with surface morphology, have the ability to influence large patches of the water hydrogen-bonding network at the protein surface, which is correlated with stability. The solvent contribution can be experimentally probed via terahertz (THz) spectroscopy, thus opening the door to the exciting perspective of rational protein design in which a systematic tuning of hydration water properties allows manipulation of protein stability and enzymatic activity. American Chemical Society 2021-06-18 /pmc/articles/PMC8317155/ /pubmed/34337607 http://dx.doi.org/10.1021/jacsau.1c00155 Text en © 2021 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Adams, Ellen M. Pezzotti, Simone Ahlers, Jonas Rüttermann, Maximilian Levin, Maxim Goldenzweig, Adi Peleg, Yoav Fleishman, Sarel J. Sagi, Irit Havenith, Martina Local Mutations Can Serve as a Game Changer for Global Protein Solvent Interaction |
title | Local Mutations Can Serve as a Game Changer for Global
Protein Solvent Interaction |
title_full | Local Mutations Can Serve as a Game Changer for Global
Protein Solvent Interaction |
title_fullStr | Local Mutations Can Serve as a Game Changer for Global
Protein Solvent Interaction |
title_full_unstemmed | Local Mutations Can Serve as a Game Changer for Global
Protein Solvent Interaction |
title_short | Local Mutations Can Serve as a Game Changer for Global
Protein Solvent Interaction |
title_sort | local mutations can serve as a game changer for global
protein solvent interaction |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8317155/ https://www.ncbi.nlm.nih.gov/pubmed/34337607 http://dx.doi.org/10.1021/jacsau.1c00155 |
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