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An Alternative Data Transformation Approach for ADA Cut Point Determination: Why Not Use a Weibull Transformation?
The testing of protein drug candidates for inducing the generation of anti-drug antibodies (ADA) plays a fundamental role in drug development. The basis of the testing strategy includes a screening assay followed by a confirmatory test. Screening assay cut points (CP) are calculated mainly based on...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8363525/ https://www.ncbi.nlm.nih.gov/pubmed/34389881 http://dx.doi.org/10.1208/s12248-021-00625-6 |
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author | Jordan, Gregor Staack, Roland F. |
author_facet | Jordan, Gregor Staack, Roland F. |
author_sort | Jordan, Gregor |
collection | PubMed |
description | The testing of protein drug candidates for inducing the generation of anti-drug antibodies (ADA) plays a fundamental role in drug development. The basis of the testing strategy includes a screening assay followed by a confirmatory test. Screening assay cut points (CP) are calculated mainly based on two approaches, either non-parametric, when the data set does not appear normally distributed, or parametric, in the case of a normal distribution. A normal distribution of data is preferred and may be achieved after outlier exclusion and, if necessary, transformation of the data. The authors present a Weibull transformation and a comparison with a decision tree-based approach that was tested on 10 data sets (healthy human volunteer matrix, different projects). Emphasis is placed on a transformation calculation that can be easily reproduced to make it accessible to non-mathematicians. The cut point value and the effect on the false positive rate as well as the number of excluded samples of both methods are compared. |
format | Online Article Text |
id | pubmed-8363525 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-83635252021-08-30 An Alternative Data Transformation Approach for ADA Cut Point Determination: Why Not Use a Weibull Transformation? Jordan, Gregor Staack, Roland F. AAPS J Protocols in Pharmaceutical Sciences The testing of protein drug candidates for inducing the generation of anti-drug antibodies (ADA) plays a fundamental role in drug development. The basis of the testing strategy includes a screening assay followed by a confirmatory test. Screening assay cut points (CP) are calculated mainly based on two approaches, either non-parametric, when the data set does not appear normally distributed, or parametric, in the case of a normal distribution. A normal distribution of data is preferred and may be achieved after outlier exclusion and, if necessary, transformation of the data. The authors present a Weibull transformation and a comparison with a decision tree-based approach that was tested on 10 data sets (healthy human volunteer matrix, different projects). Emphasis is placed on a transformation calculation that can be easily reproduced to make it accessible to non-mathematicians. The cut point value and the effect on the false positive rate as well as the number of excluded samples of both methods are compared. Springer International Publishing 2021-08-13 /pmc/articles/PMC8363525/ /pubmed/34389881 http://dx.doi.org/10.1208/s12248-021-00625-6 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Protocols in Pharmaceutical Sciences Jordan, Gregor Staack, Roland F. An Alternative Data Transformation Approach for ADA Cut Point Determination: Why Not Use a Weibull Transformation? |
title | An Alternative Data Transformation Approach for ADA Cut Point Determination: Why Not Use a Weibull Transformation? |
title_full | An Alternative Data Transformation Approach for ADA Cut Point Determination: Why Not Use a Weibull Transformation? |
title_fullStr | An Alternative Data Transformation Approach for ADA Cut Point Determination: Why Not Use a Weibull Transformation? |
title_full_unstemmed | An Alternative Data Transformation Approach for ADA Cut Point Determination: Why Not Use a Weibull Transformation? |
title_short | An Alternative Data Transformation Approach for ADA Cut Point Determination: Why Not Use a Weibull Transformation? |
title_sort | alternative data transformation approach for ada cut point determination: why not use a weibull transformation? |
topic | Protocols in Pharmaceutical Sciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8363525/ https://www.ncbi.nlm.nih.gov/pubmed/34389881 http://dx.doi.org/10.1208/s12248-021-00625-6 |
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