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Plasmid replication based on the T7 origin of replication requires a T7 RNAP variant and inactivation of ribonuclease H

T7 RNA polymerase (RNAP) is a valuable tool in biotechnology, basic research and synthetic biology due to its robust, efficient and selective transcription of genes. Here, we expand the scope of T7 RNAP to include plasmid replication. We present a novel type of plasmid, termed T7 ori plasmids that r...

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Autores principales: Becker, Katja, Meyer, Andreas, Roberts, Tania Michelle, Panke, Sven
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8373140/
https://www.ncbi.nlm.nih.gov/pubmed/34255845
http://dx.doi.org/10.1093/nar/gkab596
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author Becker, Katja
Meyer, Andreas
Roberts, Tania Michelle
Panke, Sven
author_facet Becker, Katja
Meyer, Andreas
Roberts, Tania Michelle
Panke, Sven
author_sort Becker, Katja
collection PubMed
description T7 RNA polymerase (RNAP) is a valuable tool in biotechnology, basic research and synthetic biology due to its robust, efficient and selective transcription of genes. Here, we expand the scope of T7 RNAP to include plasmid replication. We present a novel type of plasmid, termed T7 ori plasmids that replicate, in an engineered Escherichia coli, with a T7 phage origin as the sole origin of replication. We find that while the T7 replication proteins; T7 DNA polymerase, T7 single-stranded binding proteins and T7 helicase-primase are dispensable for replication, T7 RNAP is required, although dependent on a T7 RNAP variant with reduced activity. We also find that T7 RNAP-dependent replication of T7 ori plasmids requires the inactivation of cellular ribonuclease H. We show that the system is portable among different plasmid architectures and ribonuclease H-inactivated E. coli strains. Finally, we find that the copy number of T7 ori plasmids can be tuned based on the induction level of RNAP. Altogether, this study assists in the choice of an optimal genetic tool by providing a novel plasmid that requires T7 RNAP for replication.
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spelling pubmed-83731402021-08-19 Plasmid replication based on the T7 origin of replication requires a T7 RNAP variant and inactivation of ribonuclease H Becker, Katja Meyer, Andreas Roberts, Tania Michelle Panke, Sven Nucleic Acids Res Genome Integrity, Repair and Replication T7 RNA polymerase (RNAP) is a valuable tool in biotechnology, basic research and synthetic biology due to its robust, efficient and selective transcription of genes. Here, we expand the scope of T7 RNAP to include plasmid replication. We present a novel type of plasmid, termed T7 ori plasmids that replicate, in an engineered Escherichia coli, with a T7 phage origin as the sole origin of replication. We find that while the T7 replication proteins; T7 DNA polymerase, T7 single-stranded binding proteins and T7 helicase-primase are dispensable for replication, T7 RNAP is required, although dependent on a T7 RNAP variant with reduced activity. We also find that T7 RNAP-dependent replication of T7 ori plasmids requires the inactivation of cellular ribonuclease H. We show that the system is portable among different plasmid architectures and ribonuclease H-inactivated E. coli strains. Finally, we find that the copy number of T7 ori plasmids can be tuned based on the induction level of RNAP. Altogether, this study assists in the choice of an optimal genetic tool by providing a novel plasmid that requires T7 RNAP for replication. Oxford University Press 2021-07-13 /pmc/articles/PMC8373140/ /pubmed/34255845 http://dx.doi.org/10.1093/nar/gkab596 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Genome Integrity, Repair and Replication
Becker, Katja
Meyer, Andreas
Roberts, Tania Michelle
Panke, Sven
Plasmid replication based on the T7 origin of replication requires a T7 RNAP variant and inactivation of ribonuclease H
title Plasmid replication based on the T7 origin of replication requires a T7 RNAP variant and inactivation of ribonuclease H
title_full Plasmid replication based on the T7 origin of replication requires a T7 RNAP variant and inactivation of ribonuclease H
title_fullStr Plasmid replication based on the T7 origin of replication requires a T7 RNAP variant and inactivation of ribonuclease H
title_full_unstemmed Plasmid replication based on the T7 origin of replication requires a T7 RNAP variant and inactivation of ribonuclease H
title_short Plasmid replication based on the T7 origin of replication requires a T7 RNAP variant and inactivation of ribonuclease H
title_sort plasmid replication based on the t7 origin of replication requires a t7 rnap variant and inactivation of ribonuclease h
topic Genome Integrity, Repair and Replication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8373140/
https://www.ncbi.nlm.nih.gov/pubmed/34255845
http://dx.doi.org/10.1093/nar/gkab596
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