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Genetic diversity and main functional composition of Lingzhi strains from main producing areas in China

In this study, we used genotyping by sequencing (GBS) to examine the genetic diversity of 22 strains of Lingzhi and the quality differences in 15 fruit bodies of Lingzhi from different Chinese regions. The phylogenetic trees of 22 strains were constructed based on ITS (Internal transcribed spacer) a...

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Autores principales: Liu, Yuan-chao, Tang, Xiao-cui, Hu, Hui-ping, Chen, Di-ling, Xie, Yi-zhen, Liang, Xiao-wei, Li, Xiang-min, Xiao, Chun, Huang, Long-hua, Wu, Qing-ping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8379333/
https://www.ncbi.nlm.nih.gov/pubmed/34417676
http://dx.doi.org/10.1186/s13568-021-01280-y
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author Liu, Yuan-chao
Tang, Xiao-cui
Hu, Hui-ping
Chen, Di-ling
Xie, Yi-zhen
Liang, Xiao-wei
Li, Xiang-min
Xiao, Chun
Huang, Long-hua
Wu, Qing-ping
author_facet Liu, Yuan-chao
Tang, Xiao-cui
Hu, Hui-ping
Chen, Di-ling
Xie, Yi-zhen
Liang, Xiao-wei
Li, Xiang-min
Xiao, Chun
Huang, Long-hua
Wu, Qing-ping
author_sort Liu, Yuan-chao
collection PubMed
description In this study, we used genotyping by sequencing (GBS) to examine the genetic diversity of 22 strains of Lingzhi and the quality differences in 15 fruit bodies of Lingzhi from different Chinese regions. The phylogenetic trees of 22 strains were constructed based on ITS (Internal transcribed spacer) and SNP (single nucleotide polymorphism). Moisture, ash, water-soluble extracts, alcohol-soluble extracts, polysaccharides, and triterpenoids from 15 fruit bodies of Lingzhi were detected and analyzed based on Chinese Pharmacopoeia and the US Pharmacopoeia references. Moreover, the monosaccharide composition of polysaccharides was studied using PMP-HPLC, and the effect of polysaccharides on the proliferation rate of splenocytes was investigated in vitro. The identification results of these strains by the phylogenetic trees which were constructed based on ITS sequences and SNPs showed that most of the strains applied in the main producing areas of Lingzhi in China were accurate except for a few inaccurate strains. The moisture, ash, water and alcohol soluble extractive, polysaccharide and triterpenoid content of all samples were meet the requirements of the Chinese Pharmacopoeia, while the polysaccharide and triterpenoid content of less than half of the samples meet the requirements of the U.S. Pharmacopoeia. The polysaccharide extracted from these samples have different effects on the proliferation rate of spleen cells. To sum up, this is the first study that reported on the differences in Lingzhi strains from the main producing areas in China. The quality of some fruit bodies did not meet the pharmacopeia requirements, and wrong strains were used in some production areas; thus, strains should be given special attention before legal processing. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13568-021-01280-y.
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spelling pubmed-83793332021-09-08 Genetic diversity and main functional composition of Lingzhi strains from main producing areas in China Liu, Yuan-chao Tang, Xiao-cui Hu, Hui-ping Chen, Di-ling Xie, Yi-zhen Liang, Xiao-wei Li, Xiang-min Xiao, Chun Huang, Long-hua Wu, Qing-ping AMB Express Original Article In this study, we used genotyping by sequencing (GBS) to examine the genetic diversity of 22 strains of Lingzhi and the quality differences in 15 fruit bodies of Lingzhi from different Chinese regions. The phylogenetic trees of 22 strains were constructed based on ITS (Internal transcribed spacer) and SNP (single nucleotide polymorphism). Moisture, ash, water-soluble extracts, alcohol-soluble extracts, polysaccharides, and triterpenoids from 15 fruit bodies of Lingzhi were detected and analyzed based on Chinese Pharmacopoeia and the US Pharmacopoeia references. Moreover, the monosaccharide composition of polysaccharides was studied using PMP-HPLC, and the effect of polysaccharides on the proliferation rate of splenocytes was investigated in vitro. The identification results of these strains by the phylogenetic trees which were constructed based on ITS sequences and SNPs showed that most of the strains applied in the main producing areas of Lingzhi in China were accurate except for a few inaccurate strains. The moisture, ash, water and alcohol soluble extractive, polysaccharide and triterpenoid content of all samples were meet the requirements of the Chinese Pharmacopoeia, while the polysaccharide and triterpenoid content of less than half of the samples meet the requirements of the U.S. Pharmacopoeia. The polysaccharide extracted from these samples have different effects on the proliferation rate of spleen cells. To sum up, this is the first study that reported on the differences in Lingzhi strains from the main producing areas in China. The quality of some fruit bodies did not meet the pharmacopeia requirements, and wrong strains were used in some production areas; thus, strains should be given special attention before legal processing. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13568-021-01280-y. Springer Berlin Heidelberg 2021-08-21 /pmc/articles/PMC8379333/ /pubmed/34417676 http://dx.doi.org/10.1186/s13568-021-01280-y Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Article
Liu, Yuan-chao
Tang, Xiao-cui
Hu, Hui-ping
Chen, Di-ling
Xie, Yi-zhen
Liang, Xiao-wei
Li, Xiang-min
Xiao, Chun
Huang, Long-hua
Wu, Qing-ping
Genetic diversity and main functional composition of Lingzhi strains from main producing areas in China
title Genetic diversity and main functional composition of Lingzhi strains from main producing areas in China
title_full Genetic diversity and main functional composition of Lingzhi strains from main producing areas in China
title_fullStr Genetic diversity and main functional composition of Lingzhi strains from main producing areas in China
title_full_unstemmed Genetic diversity and main functional composition of Lingzhi strains from main producing areas in China
title_short Genetic diversity and main functional composition of Lingzhi strains from main producing areas in China
title_sort genetic diversity and main functional composition of lingzhi strains from main producing areas in china
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8379333/
https://www.ncbi.nlm.nih.gov/pubmed/34417676
http://dx.doi.org/10.1186/s13568-021-01280-y
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