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Assessment of metrics in next-generation sequencing experiments for use in core-genome multilocus sequence type

With the reduction in the cost of next-generation sequencing, whole-genome sequencing (WGS)–based methods such as core-genome multilocus sequence type (cgMLST) have been widely used. However, gene-based methods are required to assemble raw reads to contigs, thus possibly introducing errors into asse...

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Detalles Bibliográficos
Autores principales: Liu, Yen-Yi, Chen, Bo-Han, Chen, Chih-Chieh, Chiou, Chien-Shun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8380430/
https://www.ncbi.nlm.nih.gov/pubmed/34466283
http://dx.doi.org/10.7717/peerj.11842