StrainFLAIR: strain-level profiling of metagenomic samples using variation graphs

Current studies are shifting from the use of single linear references to representation of multiple genomes organised in pangenome graphs or variation graphs. Meanwhile, in metagenomic samples, resolving strain-level abundances is a major step in microbiome studies, as associations between strain va...

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Detalles Bibliográficos
Autores principales: Da Silva, Kévin, Pons, Nicolas, Berland, Magali, Plaza Oñate, Florian, Almeida, Mathieu, Peterlongo, Pierre
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2021
Materias:
Bioinformatics
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8388557/
https://www.ncbi.nlm.nih.gov/pubmed/34513324
http://dx.doi.org/10.7717/peerj.11884

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8388557/
https://www.ncbi.nlm.nih.gov/pubmed/34513324
http://dx.doi.org/10.7717/peerj.11884

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