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Lebanon’s Native Oenological Saccharomyces cerevisiae Flora: Assessment of Different Aspects of Genetic Diversity and Evaluation of Winemaking Potential

A total of 296 isolates of Saccharomyces cerevisiae sampled from naturally fermenting grape musts from various locations in Lebanon were typed by interdelta fingerprinting. Of these, 88 isolates were compared with oenological strains originating from various countries, using microsatellite character...

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Autores principales: Ayoub, Marie-José, Legras, Jean-Luc, Abi-Nakhoul, Pierre, Nguyen, Huu-Vang, Saliba, Rachad, Gaillardin, Claude
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8398109/
https://www.ncbi.nlm.nih.gov/pubmed/34436217
http://dx.doi.org/10.3390/jof7080678
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author Ayoub, Marie-José
Legras, Jean-Luc
Abi-Nakhoul, Pierre
Nguyen, Huu-Vang
Saliba, Rachad
Gaillardin, Claude
author_facet Ayoub, Marie-José
Legras, Jean-Luc
Abi-Nakhoul, Pierre
Nguyen, Huu-Vang
Saliba, Rachad
Gaillardin, Claude
author_sort Ayoub, Marie-José
collection PubMed
description A total of 296 isolates of Saccharomyces cerevisiae sampled from naturally fermenting grape musts from various locations in Lebanon were typed by interdelta fingerprinting. Of these, 88 isolates were compared with oenological strains originating from various countries, using microsatellite characterization at six polymorphic loci. These approaches evidenced a large diversity of the natural oenological Lebanese flora over the territory as well as in individual spontaneous fermentations. Several cases of dominance and perenniality of isolates were observed in the same wineries, where fermentations appeared to involve lineages of sibling isolates. Our work thus evidenced a “winery effect” on strains’ relatedness. Similarly, related or identical strains were also detected in vicinal wineries, suggesting strain circulation within small geographical areas and a further “vicinity effect”. Moreover, and despite its diversity, the Lebanese flora seemed interrelated, on the basis of microsatellite loci analysis, in comparison to worldwide communities. We finally tested the ability of 21 indigenous strains to act as potential starters for winemaking. Seven of them passed our pre-selection scheme and two of them at least may be good candidates for use provided pilot-scale assays confirm their suitability.
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spelling pubmed-83981092021-08-29 Lebanon’s Native Oenological Saccharomyces cerevisiae Flora: Assessment of Different Aspects of Genetic Diversity and Evaluation of Winemaking Potential Ayoub, Marie-José Legras, Jean-Luc Abi-Nakhoul, Pierre Nguyen, Huu-Vang Saliba, Rachad Gaillardin, Claude J Fungi (Basel) Article A total of 296 isolates of Saccharomyces cerevisiae sampled from naturally fermenting grape musts from various locations in Lebanon were typed by interdelta fingerprinting. Of these, 88 isolates were compared with oenological strains originating from various countries, using microsatellite characterization at six polymorphic loci. These approaches evidenced a large diversity of the natural oenological Lebanese flora over the territory as well as in individual spontaneous fermentations. Several cases of dominance and perenniality of isolates were observed in the same wineries, where fermentations appeared to involve lineages of sibling isolates. Our work thus evidenced a “winery effect” on strains’ relatedness. Similarly, related or identical strains were also detected in vicinal wineries, suggesting strain circulation within small geographical areas and a further “vicinity effect”. Moreover, and despite its diversity, the Lebanese flora seemed interrelated, on the basis of microsatellite loci analysis, in comparison to worldwide communities. We finally tested the ability of 21 indigenous strains to act as potential starters for winemaking. Seven of them passed our pre-selection scheme and two of them at least may be good candidates for use provided pilot-scale assays confirm their suitability. MDPI 2021-08-23 /pmc/articles/PMC8398109/ /pubmed/34436217 http://dx.doi.org/10.3390/jof7080678 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ayoub, Marie-José
Legras, Jean-Luc
Abi-Nakhoul, Pierre
Nguyen, Huu-Vang
Saliba, Rachad
Gaillardin, Claude
Lebanon’s Native Oenological Saccharomyces cerevisiae Flora: Assessment of Different Aspects of Genetic Diversity and Evaluation of Winemaking Potential
title Lebanon’s Native Oenological Saccharomyces cerevisiae Flora: Assessment of Different Aspects of Genetic Diversity and Evaluation of Winemaking Potential
title_full Lebanon’s Native Oenological Saccharomyces cerevisiae Flora: Assessment of Different Aspects of Genetic Diversity and Evaluation of Winemaking Potential
title_fullStr Lebanon’s Native Oenological Saccharomyces cerevisiae Flora: Assessment of Different Aspects of Genetic Diversity and Evaluation of Winemaking Potential
title_full_unstemmed Lebanon’s Native Oenological Saccharomyces cerevisiae Flora: Assessment of Different Aspects of Genetic Diversity and Evaluation of Winemaking Potential
title_short Lebanon’s Native Oenological Saccharomyces cerevisiae Flora: Assessment of Different Aspects of Genetic Diversity and Evaluation of Winemaking Potential
title_sort lebanon’s native oenological saccharomyces cerevisiae flora: assessment of different aspects of genetic diversity and evaluation of winemaking potential
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8398109/
https://www.ncbi.nlm.nih.gov/pubmed/34436217
http://dx.doi.org/10.3390/jof7080678
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