STAT: a fast, scalable, MinHash-based k-mer tool to assess Sequence Read Archive next-generation sequence submissions

Sequence Read Archive submissions to the National Center for Biotechnology Information often lack useful metadata, which limits the utility of these submissions. We describe the Sequence Taxonomic Analysis Tool (STAT), a scalable k-mer-based tool for fast assessment of taxonomic diversity intrinsic...

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Detalles Bibliográficos
Autores principales: Katz, Kenneth S., Shutov, Oleg, Lapoint, Richard, Kimelman, Michael, Brister, J. Rodney, O’Sullivan, Christopher
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Method
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8450716/
https://www.ncbi.nlm.nih.gov/pubmed/34544477
http://dx.doi.org/10.1186/s13059-021-02490-0

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8450716/
https://www.ncbi.nlm.nih.gov/pubmed/34544477
http://dx.doi.org/10.1186/s13059-021-02490-0

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