Cargando…

HiCRep.py: fast comparison of Hi-C contact matrices in Python

MOTIVATION: Hi-C is the most widely used assay for investigating genome-wide 3D organization of chromatin. When working with Hi-C data, it is often useful to calculate the similarity between contact matrices in order to assess experimental reproducibility or to quantify relationships among Hi-C data...

Descripción completa

Detalles Bibliográficos
Autores principales: Lin, Dejun, Sanders, Justin, Noble, William Stafford
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8479650/
https://www.ncbi.nlm.nih.gov/pubmed/33576390
http://dx.doi.org/10.1093/bioinformatics/btab097