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Rapid incidence estimation from SARS-CoV-2 genomes reveals decreased case detection in Europe during summer 2020

By October 2021, 230 million SARS-CoV-2 diagnoses have been reported. Yet, a considerable proportion of cases remains undetected. Here, we propose GInPipe, a method that rapidly reconstructs SARS-CoV-2 incidence profiles solely from publicly available, time-stamped viral genomes. We validate GInPipe...

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Detalles Bibliográficos
Autores principales: Smith, Maureen Rebecca, Trofimova, Maria, Weber, Ariane, Duport, Yannick, Kühnert, Denise, von Kleist, Max
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8517019/
https://www.ncbi.nlm.nih.gov/pubmed/34650062
http://dx.doi.org/10.1038/s41467-021-26267-y