Megadepth: efficient coverage quantification for BigWigs and BAMs

MOTIVATION: A common way to summarize sequencing datasets is to quantify data lying within genes or other genomic intervals. This can be slow and can require different tools for different input file types. RESULTS: Megadepth is a fast tool for quantifying alignments and coverage for BigWig and BAM/C...

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Detalles Bibliográficos
Autores principales: Wilks, Christopher, Ahmed, Omar, Baker, Daniel N, Zhang, David, Collado-Torres, Leonardo, Langmead, Ben
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8528031/
https://www.ncbi.nlm.nih.gov/pubmed/33693500
http://dx.doi.org/10.1093/bioinformatics/btab152

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8528031/
https://www.ncbi.nlm.nih.gov/pubmed/33693500
http://dx.doi.org/10.1093/bioinformatics/btab152

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