High-resolution sweep metagenomics using fast probabilistic inference

Determining the composition of bacterial communities beyond the level of a genus or species is challenging because of the considerable overlap between genomes representing close relatives. Here, we present the mSWEEP pipeline for identifying and estimating the relative sequence abundances of bacteri...

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Detalles Bibliográficos
Autores principales: Mäklin, Tommi, Kallonen, Teemu, David, Sophia, Boinett, Christine J., Pascoe, Ben, Méric, Guillaume, Aanensen, David M., Feil, Edward J., Baker, Stephen, Parkhill, Julian, Sheppard, Samuel K., Corander, Jukka, Honkela, Antti
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000 Research Limited 2021
Materias:
Method Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8543175/
https://www.ncbi.nlm.nih.gov/pubmed/34746439
http://dx.doi.org/10.12688/wellcomeopenres.15639.2

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8543175/
https://www.ncbi.nlm.nih.gov/pubmed/34746439
http://dx.doi.org/10.12688/wellcomeopenres.15639.2

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