EMPress Enables Tree-Guided, Interactive, and Exploratory Analyses of Multi-omic Data Sets

Standard workflows for analyzing microbiomes often include the creation and curation of phylogenetic trees. Here we present EMPress, an interactive web tool for visualizing trees in the context of microbiome, metabolome, and other community data scalable to trees with well over 500,000 nodes. EMPres...

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Detalles Bibliográficos
Autores principales: Cantrell, Kalen, Fedarko, Marcus W., Rahman, Gibraan, McDonald, Daniel, Yang, Yimeng, Zaw, Thant, Gonzalez, Antonio, Janssen, Stefan, Estaki, Mehrbod, Haiminen, Niina, Beck, Kristen L., Zhu, Qiyun, Sayyari, Erfan, Morton, James T., Armstrong, George, Tripathi, Anupriya, Gauglitz, Julia M., Marotz, Clarisse, Matteson, Nathaniel L., Martino, Cameron, Sanders, Jon G., Carrieri, Anna Paola, Song, Se Jin, Swafford, Austin D., Dorrestein, Pieter C., Andersen, Kristian G., Parida, Laxmi, Kim, Ho-Cheol, Vázquez-Baeza, Yoshiki, Knight, Rob
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2021
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8546999/
https://www.ncbi.nlm.nih.gov/pubmed/33727399
http://dx.doi.org/10.1128/mSystems.01216-20

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8546999/
https://www.ncbi.nlm.nih.gov/pubmed/33727399
http://dx.doi.org/10.1128/mSystems.01216-20

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