iWhale: a computational pipeline based on Docker and SCons for detection and annotation of somatic variants in cancer WES data

Whole exome sequencing (WES) is a powerful approach for discovering sequence variants in cancer cells but its time effectiveness is limited by the complexity and issues of WES data analysis. Here we present iWhale, a customizable pipeline based on Docker and SCons, reliably detecting somatic variant...

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Detalles Bibliográficos
Autores principales: Binatti, Andrea, Bresolin, Silvia, Bortoluzzi, Stefania, Coppe, Alessandro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Problem Solving Protocol
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8557746/
https://www.ncbi.nlm.nih.gov/pubmed/32436933
http://dx.doi.org/10.1093/bib/bbaa065

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8557746/
https://www.ncbi.nlm.nih.gov/pubmed/32436933
http://dx.doi.org/10.1093/bib/bbaa065

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