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iWhale: a computational pipeline based on Docker and SCons for detection and annotation of somatic variants in cancer WES data

Whole exome sequencing (WES) is a powerful approach for discovering sequence variants in cancer cells but its time effectiveness is limited by the complexity and issues of WES data analysis. Here we present iWhale, a customizable pipeline based on Docker and SCons, reliably detecting somatic variant...

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Detalles Bibliográficos
Autores principales:	Binatti, Andrea, Bresolin, Silvia, Bortoluzzi, Stefania, Coppe, Alessandro
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2020
Materias:	Problem Solving Protocol
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8557746/ https://www.ncbi.nlm.nih.gov/pubmed/32436933 http://dx.doi.org/10.1093/bib/bbaa065

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