Cargando…
Cross-species transcriptomic signatures predict response to MK2 inhibition in mouse models of chronic inflammation
Inflammatory bowel diseases (IBDs) are genetically complex and exhibit significant inter-patient heterogeneity in disease presentation and therapeutic response. Here, we show that mouse models of IBD exhibit variable responses to inhibition of MK2, a pro-inflammatory serine/threonine kinase, and tha...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8609096/ https://www.ncbi.nlm.nih.gov/pubmed/34849469 http://dx.doi.org/10.1016/j.isci.2021.103406 |
_version_ | 1784602856951644160 |
---|---|
author | Suarez-Lopez, Lucia Shui, Bing Brubaker, Douglas K. Hill, Marza Bergendorf, Alexander Changelian, Paul S. Laguna, Aisha Starchenko, Alina Lauffenburger, Douglas A. Haigis, Kevin M. |
author_facet | Suarez-Lopez, Lucia Shui, Bing Brubaker, Douglas K. Hill, Marza Bergendorf, Alexander Changelian, Paul S. Laguna, Aisha Starchenko, Alina Lauffenburger, Douglas A. Haigis, Kevin M. |
author_sort | Suarez-Lopez, Lucia |
collection | PubMed |
description | Inflammatory bowel diseases (IBDs) are genetically complex and exhibit significant inter-patient heterogeneity in disease presentation and therapeutic response. Here, we show that mouse models of IBD exhibit variable responses to inhibition of MK2, a pro-inflammatory serine/threonine kinase, and that MK2 inhibition suppresses inflammation by targeting inflammatory monocytes and neutrophils in murine models. Using a computational approach (TransComp-R) that allows for cross-species comparison of transcriptomic features, we identified an IBD patient subgroup that is predicted to respond to MK2 inhibition, and an independent preclinical model of chronic intestinal inflammation predicted to be non-responsive, which we validated experimentally. Thus, cross-species mouse-human translation approaches can help to identify patient subpopulations in which to deploy new therapies. |
format | Online Article Text |
id | pubmed-8609096 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-86090962021-11-29 Cross-species transcriptomic signatures predict response to MK2 inhibition in mouse models of chronic inflammation Suarez-Lopez, Lucia Shui, Bing Brubaker, Douglas K. Hill, Marza Bergendorf, Alexander Changelian, Paul S. Laguna, Aisha Starchenko, Alina Lauffenburger, Douglas A. Haigis, Kevin M. iScience Article Inflammatory bowel diseases (IBDs) are genetically complex and exhibit significant inter-patient heterogeneity in disease presentation and therapeutic response. Here, we show that mouse models of IBD exhibit variable responses to inhibition of MK2, a pro-inflammatory serine/threonine kinase, and that MK2 inhibition suppresses inflammation by targeting inflammatory monocytes and neutrophils in murine models. Using a computational approach (TransComp-R) that allows for cross-species comparison of transcriptomic features, we identified an IBD patient subgroup that is predicted to respond to MK2 inhibition, and an independent preclinical model of chronic intestinal inflammation predicted to be non-responsive, which we validated experimentally. Thus, cross-species mouse-human translation approaches can help to identify patient subpopulations in which to deploy new therapies. Elsevier 2021-11-07 /pmc/articles/PMC8609096/ /pubmed/34849469 http://dx.doi.org/10.1016/j.isci.2021.103406 Text en © 2021 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Suarez-Lopez, Lucia Shui, Bing Brubaker, Douglas K. Hill, Marza Bergendorf, Alexander Changelian, Paul S. Laguna, Aisha Starchenko, Alina Lauffenburger, Douglas A. Haigis, Kevin M. Cross-species transcriptomic signatures predict response to MK2 inhibition in mouse models of chronic inflammation |
title | Cross-species transcriptomic signatures predict response to MK2 inhibition in mouse models of chronic inflammation |
title_full | Cross-species transcriptomic signatures predict response to MK2 inhibition in mouse models of chronic inflammation |
title_fullStr | Cross-species transcriptomic signatures predict response to MK2 inhibition in mouse models of chronic inflammation |
title_full_unstemmed | Cross-species transcriptomic signatures predict response to MK2 inhibition in mouse models of chronic inflammation |
title_short | Cross-species transcriptomic signatures predict response to MK2 inhibition in mouse models of chronic inflammation |
title_sort | cross-species transcriptomic signatures predict response to mk2 inhibition in mouse models of chronic inflammation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8609096/ https://www.ncbi.nlm.nih.gov/pubmed/34849469 http://dx.doi.org/10.1016/j.isci.2021.103406 |
work_keys_str_mv | AT suarezlopezlucia crossspeciestranscriptomicsignaturespredictresponsetomk2inhibitioninmousemodelsofchronicinflammation AT shuibing crossspeciestranscriptomicsignaturespredictresponsetomk2inhibitioninmousemodelsofchronicinflammation AT brubakerdouglask crossspeciestranscriptomicsignaturespredictresponsetomk2inhibitioninmousemodelsofchronicinflammation AT hillmarza crossspeciestranscriptomicsignaturespredictresponsetomk2inhibitioninmousemodelsofchronicinflammation AT bergendorfalexander crossspeciestranscriptomicsignaturespredictresponsetomk2inhibitioninmousemodelsofchronicinflammation AT changelianpauls crossspeciestranscriptomicsignaturespredictresponsetomk2inhibitioninmousemodelsofchronicinflammation AT lagunaaisha crossspeciestranscriptomicsignaturespredictresponsetomk2inhibitioninmousemodelsofchronicinflammation AT starchenkoalina crossspeciestranscriptomicsignaturespredictresponsetomk2inhibitioninmousemodelsofchronicinflammation AT lauffenburgerdouglasa crossspeciestranscriptomicsignaturespredictresponsetomk2inhibitioninmousemodelsofchronicinflammation AT haigiskevinm crossspeciestranscriptomicsignaturespredictresponsetomk2inhibitioninmousemodelsofchronicinflammation |