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Instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models
BACKGROUND: In many applications of instrumental variable (IV) methods, the treatments of interest are intrinsically time-varying and outcomes of interest are failure time outcomes. A common example is Mendelian randomization (MR), which uses genetic variants as proposed IVs. In this article, we pre...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8620657/ https://www.ncbi.nlm.nih.gov/pubmed/34823502 http://dx.doi.org/10.1186/s12874-021-01449-w |
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author | Shi, Joy Swanson, Sonja A. Kraft, Peter Rosner, Bernard De Vivo, Immaculata Hernán, Miguel A. |
author_facet | Shi, Joy Swanson, Sonja A. Kraft, Peter Rosner, Bernard De Vivo, Immaculata Hernán, Miguel A. |
author_sort | Shi, Joy |
collection | PubMed |
description | BACKGROUND: In many applications of instrumental variable (IV) methods, the treatments of interest are intrinsically time-varying and outcomes of interest are failure time outcomes. A common example is Mendelian randomization (MR), which uses genetic variants as proposed IVs. In this article, we present a novel application of g-estimation of structural nested cumulative failure models (SNCFTMs), which can accommodate multiple measures of a time-varying treatment when modelling a failure time outcome in an IV analysis. METHODS: A SNCFTM models the ratio of two conditional mean counterfactual outcomes at time k under two treatment strategies which differ only at an earlier time m. These models can be extended to accommodate inverse probability of censoring weights, and can be applied to case-control data. We also describe how the g-estimates of the SNCFTM parameters can be used to calculate marginal cumulative risks under nondynamic treatment strategies. We examine the performance of this method using simulated data, and present an application of these models by conducting an MR study of alcohol intake and endometrial cancer using longitudinal observational data from the Nurses’ Health Study. RESULTS: Our simulations found that estimates from SNCFTMs which used an IV approach were similar to those obtained from SNCFTMs which adjusted for confounders, and similar to those obtained from the g-formula approach when the outcome was rare. In our data application, the cumulative risk of endometrial cancer from age 45 to age 72 under the “never drink” strategy (4.0%) was similar to that under the “always ½ drink per day” strategy (4.3%). CONCLUSIONS: SNCFTMs can be used to conduct MR and other IV analyses with time-varying treatments and failure time outcomes. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-021-01449-w. |
format | Online Article Text |
id | pubmed-8620657 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-86206572021-11-29 Instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models Shi, Joy Swanson, Sonja A. Kraft, Peter Rosner, Bernard De Vivo, Immaculata Hernán, Miguel A. BMC Med Res Methodol Research BACKGROUND: In many applications of instrumental variable (IV) methods, the treatments of interest are intrinsically time-varying and outcomes of interest are failure time outcomes. A common example is Mendelian randomization (MR), which uses genetic variants as proposed IVs. In this article, we present a novel application of g-estimation of structural nested cumulative failure models (SNCFTMs), which can accommodate multiple measures of a time-varying treatment when modelling a failure time outcome in an IV analysis. METHODS: A SNCFTM models the ratio of two conditional mean counterfactual outcomes at time k under two treatment strategies which differ only at an earlier time m. These models can be extended to accommodate inverse probability of censoring weights, and can be applied to case-control data. We also describe how the g-estimates of the SNCFTM parameters can be used to calculate marginal cumulative risks under nondynamic treatment strategies. We examine the performance of this method using simulated data, and present an application of these models by conducting an MR study of alcohol intake and endometrial cancer using longitudinal observational data from the Nurses’ Health Study. RESULTS: Our simulations found that estimates from SNCFTMs which used an IV approach were similar to those obtained from SNCFTMs which adjusted for confounders, and similar to those obtained from the g-formula approach when the outcome was rare. In our data application, the cumulative risk of endometrial cancer from age 45 to age 72 under the “never drink” strategy (4.0%) was similar to that under the “always ½ drink per day” strategy (4.3%). CONCLUSIONS: SNCFTMs can be used to conduct MR and other IV analyses with time-varying treatments and failure time outcomes. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-021-01449-w. BioMed Central 2021-11-25 /pmc/articles/PMC8620657/ /pubmed/34823502 http://dx.doi.org/10.1186/s12874-021-01449-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Shi, Joy Swanson, Sonja A. Kraft, Peter Rosner, Bernard De Vivo, Immaculata Hernán, Miguel A. Instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models |
title | Instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models |
title_full | Instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models |
title_fullStr | Instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models |
title_full_unstemmed | Instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models |
title_short | Instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models |
title_sort | instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8620657/ https://www.ncbi.nlm.nih.gov/pubmed/34823502 http://dx.doi.org/10.1186/s12874-021-01449-w |
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