Cargando…

Instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models

BACKGROUND: In many applications of instrumental variable (IV) methods, the treatments of interest are intrinsically time-varying and outcomes of interest are failure time outcomes. A common example is Mendelian randomization (MR), which uses genetic variants as proposed IVs. In this article, we pre...

Descripción completa

Detalles Bibliográficos
Autores principales: Shi, Joy, Swanson, Sonja A., Kraft, Peter, Rosner, Bernard, De Vivo, Immaculata, Hernán, Miguel A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8620657/
https://www.ncbi.nlm.nih.gov/pubmed/34823502
http://dx.doi.org/10.1186/s12874-021-01449-w
_version_ 1784605273337364480
author Shi, Joy
Swanson, Sonja A.
Kraft, Peter
Rosner, Bernard
De Vivo, Immaculata
Hernán, Miguel A.
author_facet Shi, Joy
Swanson, Sonja A.
Kraft, Peter
Rosner, Bernard
De Vivo, Immaculata
Hernán, Miguel A.
author_sort Shi, Joy
collection PubMed
description BACKGROUND: In many applications of instrumental variable (IV) methods, the treatments of interest are intrinsically time-varying and outcomes of interest are failure time outcomes. A common example is Mendelian randomization (MR), which uses genetic variants as proposed IVs. In this article, we present a novel application of g-estimation of structural nested cumulative failure models (SNCFTMs), which can accommodate multiple measures of a time-varying treatment when modelling a failure time outcome in an IV analysis. METHODS: A SNCFTM models the ratio of two conditional mean counterfactual outcomes at time k under two treatment strategies which differ only at an earlier time m. These models can be extended to accommodate inverse probability of censoring weights, and can be applied to case-control data. We also describe how the g-estimates of the SNCFTM parameters can be used to calculate marginal cumulative risks under nondynamic treatment strategies. We examine the performance of this method using simulated data, and present an application of these models by conducting an MR study of alcohol intake and endometrial cancer using longitudinal observational data from the Nurses’ Health Study. RESULTS: Our simulations found that estimates from SNCFTMs which used an IV approach were similar to those obtained from SNCFTMs which adjusted for confounders, and similar to those obtained from the g-formula approach when the outcome was rare. In our data application, the cumulative risk of endometrial cancer from age 45 to age 72 under the “never drink” strategy (4.0%) was similar to that under the “always ½ drink per day” strategy (4.3%). CONCLUSIONS: SNCFTMs can be used to conduct MR and other IV analyses with time-varying treatments and failure time outcomes. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-021-01449-w.
format Online
Article
Text
id pubmed-8620657
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-86206572021-11-29 Instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models Shi, Joy Swanson, Sonja A. Kraft, Peter Rosner, Bernard De Vivo, Immaculata Hernán, Miguel A. BMC Med Res Methodol Research BACKGROUND: In many applications of instrumental variable (IV) methods, the treatments of interest are intrinsically time-varying and outcomes of interest are failure time outcomes. A common example is Mendelian randomization (MR), which uses genetic variants as proposed IVs. In this article, we present a novel application of g-estimation of structural nested cumulative failure models (SNCFTMs), which can accommodate multiple measures of a time-varying treatment when modelling a failure time outcome in an IV analysis. METHODS: A SNCFTM models the ratio of two conditional mean counterfactual outcomes at time k under two treatment strategies which differ only at an earlier time m. These models can be extended to accommodate inverse probability of censoring weights, and can be applied to case-control data. We also describe how the g-estimates of the SNCFTM parameters can be used to calculate marginal cumulative risks under nondynamic treatment strategies. We examine the performance of this method using simulated data, and present an application of these models by conducting an MR study of alcohol intake and endometrial cancer using longitudinal observational data from the Nurses’ Health Study. RESULTS: Our simulations found that estimates from SNCFTMs which used an IV approach were similar to those obtained from SNCFTMs which adjusted for confounders, and similar to those obtained from the g-formula approach when the outcome was rare. In our data application, the cumulative risk of endometrial cancer from age 45 to age 72 under the “never drink” strategy (4.0%) was similar to that under the “always ½ drink per day” strategy (4.3%). CONCLUSIONS: SNCFTMs can be used to conduct MR and other IV analyses with time-varying treatments and failure time outcomes. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-021-01449-w. BioMed Central 2021-11-25 /pmc/articles/PMC8620657/ /pubmed/34823502 http://dx.doi.org/10.1186/s12874-021-01449-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Shi, Joy
Swanson, Sonja A.
Kraft, Peter
Rosner, Bernard
De Vivo, Immaculata
Hernán, Miguel A.
Instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models
title Instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models
title_full Instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models
title_fullStr Instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models
title_full_unstemmed Instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models
title_short Instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models
title_sort instrumental variable estimation for a time-varying treatment and a time-to-event outcome via structural nested cumulative failure time models
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8620657/
https://www.ncbi.nlm.nih.gov/pubmed/34823502
http://dx.doi.org/10.1186/s12874-021-01449-w
work_keys_str_mv AT shijoy instrumentalvariableestimationforatimevaryingtreatmentandatimetoeventoutcomeviastructuralnestedcumulativefailuretimemodels
AT swansonsonjaa instrumentalvariableestimationforatimevaryingtreatmentandatimetoeventoutcomeviastructuralnestedcumulativefailuretimemodels
AT kraftpeter instrumentalvariableestimationforatimevaryingtreatmentandatimetoeventoutcomeviastructuralnestedcumulativefailuretimemodels
AT rosnerbernard instrumentalvariableestimationforatimevaryingtreatmentandatimetoeventoutcomeviastructuralnestedcumulativefailuretimemodels
AT devivoimmaculata instrumentalvariableestimationforatimevaryingtreatmentandatimetoeventoutcomeviastructuralnestedcumulativefailuretimemodels
AT hernanmiguela instrumentalvariableestimationforatimevaryingtreatmentandatimetoeventoutcomeviastructuralnestedcumulativefailuretimemodels