Estimating repeat spectra and genome length from low-coverage genome skims with RESPECT

The cost of sequencing the genome is dropping at a much faster rate compared to assembling and finishing the genome. The use of lightly sampled genomes (genome-skims) could be transformative for genomic ecology, and results using k-mers have shown the advantage of this approach in identification and...

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Detalles Bibliográficos
Autores principales: Sarmashghi, Shahab, Balaban, Metin, Rachtman, Eleonora, Touri, Behrouz, Mirarab, Siavash, Bafna, Vineet
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8629397/
https://www.ncbi.nlm.nih.gov/pubmed/34780468
http://dx.doi.org/10.1371/journal.pcbi.1009449

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8629397/
https://www.ncbi.nlm.nih.gov/pubmed/34780468
http://dx.doi.org/10.1371/journal.pcbi.1009449

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