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Estimating repeat spectra and genome length from low-coverage genome skims with RESPECT
The cost of sequencing the genome is dropping at a much faster rate compared to assembling and finishing the genome. The use of lightly sampled genomes (genome-skims) could be transformative for genomic ecology, and results using k-mers have shown the advantage of this approach in identification and...
Autores principales: | Sarmashghi, Shahab, Balaban, Metin, Rachtman, Eleonora, Touri, Behrouz, Mirarab, Siavash, Bafna, Vineet |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8629397/ https://www.ncbi.nlm.nih.gov/pubmed/34780468 http://dx.doi.org/10.1371/journal.pcbi.1009449 |
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