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Tracing the Incorporation of the “9(th) Sulfur” into the Nitrogenase Cofactor Precursor with Selenite and Tellurite

The Mo-nitrogenase catalyzes the reduction of N(2) to NH(3) at its cofactor, an [(R-homocitrate)MoFe(7)S(9)C] cluster synthesized via the formation of a [Fe(8)S(9)C] L-cluster prior to the insertion of Mo and homocitrate. Previously, we have identified a [Fe(8)S(8)C] L*-cluster, which is homologous...

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Autores principales: Tanifuji, Kazuki, Jasniewski, Andrew J., Villarreal, David, Stiebritz, Martin T., Lee, Chi Chung, Wilcoxen, Jarett, Okhi, Yasuhiro, Chatterjee, Ruchira, Bogacz, Isabel, Yano, Junko, Kern, Jan, Hedman, Britt, Hodgson, Keith O., Britt, R. David, Hu, Yilin, Ribbe, Markus W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8629924/
https://www.ncbi.nlm.nih.gov/pubmed/34635813
http://dx.doi.org/10.1038/s41557-021-00799-8
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author Tanifuji, Kazuki
Jasniewski, Andrew J.
Villarreal, David
Stiebritz, Martin T.
Lee, Chi Chung
Wilcoxen, Jarett
Okhi, Yasuhiro
Chatterjee, Ruchira
Bogacz, Isabel
Yano, Junko
Kern, Jan
Hedman, Britt
Hodgson, Keith O.
Britt, R. David
Hu, Yilin
Ribbe, Markus W.
author_facet Tanifuji, Kazuki
Jasniewski, Andrew J.
Villarreal, David
Stiebritz, Martin T.
Lee, Chi Chung
Wilcoxen, Jarett
Okhi, Yasuhiro
Chatterjee, Ruchira
Bogacz, Isabel
Yano, Junko
Kern, Jan
Hedman, Britt
Hodgson, Keith O.
Britt, R. David
Hu, Yilin
Ribbe, Markus W.
author_sort Tanifuji, Kazuki
collection PubMed
description The Mo-nitrogenase catalyzes the reduction of N(2) to NH(3) at its cofactor, an [(R-homocitrate)MoFe(7)S(9)C] cluster synthesized via the formation of a [Fe(8)S(9)C] L-cluster prior to the insertion of Mo and homocitrate. Previously, we have identified a [Fe(8)S(8)C] L*-cluster, which is homologous to the core structure of the L-cluster but lacks the ‘9(th) sulfur’ in the belt region. However, direct evidence and mechanistic details of the L*- to L-cluster conversion upon ‘9(th) sulfur’ insertion remain elusive. Here, we trace the ‘9(th) sulfur’ insertion using SeO(3)(2−) and TeO(3)(2−) as ‘labeled’ SO(3)(2−). Biochemical, EPR and XAS/EXAFS studies suggest a role of the ‘9(th) sulfur’ in cluster transfer during cofactor biosynthesis while revealing the incorporation of Se(2−)- and Te(2−)-like species into the L-cluster. DFT calculations further point to a plausible mechanism involving in-situ reduction of SO(3)(2−) to S(2−), thereby suggesting the utility of this reaction to label the catalytically-important belt region for mechanistic investigations of nitrogenase.
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spelling pubmed-86299242022-04-11 Tracing the Incorporation of the “9(th) Sulfur” into the Nitrogenase Cofactor Precursor with Selenite and Tellurite Tanifuji, Kazuki Jasniewski, Andrew J. Villarreal, David Stiebritz, Martin T. Lee, Chi Chung Wilcoxen, Jarett Okhi, Yasuhiro Chatterjee, Ruchira Bogacz, Isabel Yano, Junko Kern, Jan Hedman, Britt Hodgson, Keith O. Britt, R. David Hu, Yilin Ribbe, Markus W. Nat Chem Article The Mo-nitrogenase catalyzes the reduction of N(2) to NH(3) at its cofactor, an [(R-homocitrate)MoFe(7)S(9)C] cluster synthesized via the formation of a [Fe(8)S(9)C] L-cluster prior to the insertion of Mo and homocitrate. Previously, we have identified a [Fe(8)S(8)C] L*-cluster, which is homologous to the core structure of the L-cluster but lacks the ‘9(th) sulfur’ in the belt region. However, direct evidence and mechanistic details of the L*- to L-cluster conversion upon ‘9(th) sulfur’ insertion remain elusive. Here, we trace the ‘9(th) sulfur’ insertion using SeO(3)(2−) and TeO(3)(2−) as ‘labeled’ SO(3)(2−). Biochemical, EPR and XAS/EXAFS studies suggest a role of the ‘9(th) sulfur’ in cluster transfer during cofactor biosynthesis while revealing the incorporation of Se(2−)- and Te(2−)-like species into the L-cluster. DFT calculations further point to a plausible mechanism involving in-situ reduction of SO(3)(2−) to S(2−), thereby suggesting the utility of this reaction to label the catalytically-important belt region for mechanistic investigations of nitrogenase. 2021-10-11 2021-12 /pmc/articles/PMC8629924/ /pubmed/34635813 http://dx.doi.org/10.1038/s41557-021-00799-8 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use: https://www.springernature.com/gp/open-research/policies/accepted-manuscript-terms
spellingShingle Article
Tanifuji, Kazuki
Jasniewski, Andrew J.
Villarreal, David
Stiebritz, Martin T.
Lee, Chi Chung
Wilcoxen, Jarett
Okhi, Yasuhiro
Chatterjee, Ruchira
Bogacz, Isabel
Yano, Junko
Kern, Jan
Hedman, Britt
Hodgson, Keith O.
Britt, R. David
Hu, Yilin
Ribbe, Markus W.
Tracing the Incorporation of the “9(th) Sulfur” into the Nitrogenase Cofactor Precursor with Selenite and Tellurite
title Tracing the Incorporation of the “9(th) Sulfur” into the Nitrogenase Cofactor Precursor with Selenite and Tellurite
title_full Tracing the Incorporation of the “9(th) Sulfur” into the Nitrogenase Cofactor Precursor with Selenite and Tellurite
title_fullStr Tracing the Incorporation of the “9(th) Sulfur” into the Nitrogenase Cofactor Precursor with Selenite and Tellurite
title_full_unstemmed Tracing the Incorporation of the “9(th) Sulfur” into the Nitrogenase Cofactor Precursor with Selenite and Tellurite
title_short Tracing the Incorporation of the “9(th) Sulfur” into the Nitrogenase Cofactor Precursor with Selenite and Tellurite
title_sort tracing the incorporation of the “9(th) sulfur” into the nitrogenase cofactor precursor with selenite and tellurite
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8629924/
https://www.ncbi.nlm.nih.gov/pubmed/34635813
http://dx.doi.org/10.1038/s41557-021-00799-8
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