PEPATAC: an optimized pipeline for ATAC-seq data analysis with serial alignments

As chromatin accessibility data from ATAC-seq experiments continues to expand, there is continuing need for standardized analysis pipelines. Here, we present PEPATAC, an ATAC-seq pipeline that is easily applied to ATAC-seq projects of any size, from one-off experiments to large-scale sequencing proj...

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Detalles Bibliográficos
Autores principales: Smith, Jason P, Corces, M Ryan, Xu, Jin, Reuter, Vincent P, Chang, Howard Y, Sheffield, Nathan C
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
APP Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8632735/
https://www.ncbi.nlm.nih.gov/pubmed/34859208
http://dx.doi.org/10.1093/nargab/lqab101

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8632735/
https://www.ncbi.nlm.nih.gov/pubmed/34859208
http://dx.doi.org/10.1093/nargab/lqab101

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