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Mechanistic models of blood cell fate decisions in the era of single-cell data
Billions of functionally distinct blood cells emerge from a pool of hematopoietic stem cells in our bodies every day. This progressive differentiation process is hierarchically structured and remarkably robust. We provide an introductory review to mathematical approaches addressing the functional as...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier Ltd
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8660645/ https://www.ncbi.nlm.nih.gov/pubmed/34950807 http://dx.doi.org/10.1016/j.coisb.2021.100355 |
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author | Glauche, Ingmar Marr, Carsten |
author_facet | Glauche, Ingmar Marr, Carsten |
author_sort | Glauche, Ingmar |
collection | PubMed |
description | Billions of functionally distinct blood cells emerge from a pool of hematopoietic stem cells in our bodies every day. This progressive differentiation process is hierarchically structured and remarkably robust. We provide an introductory review to mathematical approaches addressing the functional aspects of how lineage choice is potentially implemented on a molecular level. Emerging from studies on the mutual repression of key transcription factors, we illustrate how those simple concepts have been challenged in recent years and subsequently extended. Especially, the analysis of omics data on the single-cell level with computational tools provides descriptive insights on a yet unknown level, while their embedding into a consistent mechanistic and mathematical framework is still incomplete. |
format | Online Article Text |
id | pubmed-8660645 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-86606452021-12-21 Mechanistic models of blood cell fate decisions in the era of single-cell data Glauche, Ingmar Marr, Carsten Curr Opin Syst Biol Article Billions of functionally distinct blood cells emerge from a pool of hematopoietic stem cells in our bodies every day. This progressive differentiation process is hierarchically structured and remarkably robust. We provide an introductory review to mathematical approaches addressing the functional aspects of how lineage choice is potentially implemented on a molecular level. Emerging from studies on the mutual repression of key transcription factors, we illustrate how those simple concepts have been challenged in recent years and subsequently extended. Especially, the analysis of omics data on the single-cell level with computational tools provides descriptive insights on a yet unknown level, while their embedding into a consistent mechanistic and mathematical framework is still incomplete. Elsevier Ltd 2021-12 /pmc/articles/PMC8660645/ /pubmed/34950807 http://dx.doi.org/10.1016/j.coisb.2021.100355 Text en © 2021 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Glauche, Ingmar Marr, Carsten Mechanistic models of blood cell fate decisions in the era of single-cell data |
title | Mechanistic models of blood cell fate decisions in the era of single-cell data |
title_full | Mechanistic models of blood cell fate decisions in the era of single-cell data |
title_fullStr | Mechanistic models of blood cell fate decisions in the era of single-cell data |
title_full_unstemmed | Mechanistic models of blood cell fate decisions in the era of single-cell data |
title_short | Mechanistic models of blood cell fate decisions in the era of single-cell data |
title_sort | mechanistic models of blood cell fate decisions in the era of single-cell data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8660645/ https://www.ncbi.nlm.nih.gov/pubmed/34950807 http://dx.doi.org/10.1016/j.coisb.2021.100355 |
work_keys_str_mv | AT glaucheingmar mechanisticmodelsofbloodcellfatedecisionsintheeraofsinglecelldata AT marrcarsten mechanisticmodelsofbloodcellfatedecisionsintheeraofsinglecelldata |