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Mechanistic models of blood cell fate decisions in the era of single-cell data

Billions of functionally distinct blood cells emerge from a pool of hematopoietic stem cells in our bodies every day. This progressive differentiation process is hierarchically structured and remarkably robust. We provide an introductory review to mathematical approaches addressing the functional as...

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Detalles Bibliográficos
Autores principales: Glauche, Ingmar, Marr, Carsten
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8660645/
https://www.ncbi.nlm.nih.gov/pubmed/34950807
http://dx.doi.org/10.1016/j.coisb.2021.100355
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author Glauche, Ingmar
Marr, Carsten
author_facet Glauche, Ingmar
Marr, Carsten
author_sort Glauche, Ingmar
collection PubMed
description Billions of functionally distinct blood cells emerge from a pool of hematopoietic stem cells in our bodies every day. This progressive differentiation process is hierarchically structured and remarkably robust. We provide an introductory review to mathematical approaches addressing the functional aspects of how lineage choice is potentially implemented on a molecular level. Emerging from studies on the mutual repression of key transcription factors, we illustrate how those simple concepts have been challenged in recent years and subsequently extended. Especially, the analysis of omics data on the single-cell level with computational tools provides descriptive insights on a yet unknown level, while their embedding into a consistent mechanistic and mathematical framework is still incomplete.
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spelling pubmed-86606452021-12-21 Mechanistic models of blood cell fate decisions in the era of single-cell data Glauche, Ingmar Marr, Carsten Curr Opin Syst Biol Article Billions of functionally distinct blood cells emerge from a pool of hematopoietic stem cells in our bodies every day. This progressive differentiation process is hierarchically structured and remarkably robust. We provide an introductory review to mathematical approaches addressing the functional aspects of how lineage choice is potentially implemented on a molecular level. Emerging from studies on the mutual repression of key transcription factors, we illustrate how those simple concepts have been challenged in recent years and subsequently extended. Especially, the analysis of omics data on the single-cell level with computational tools provides descriptive insights on a yet unknown level, while their embedding into a consistent mechanistic and mathematical framework is still incomplete. Elsevier Ltd 2021-12 /pmc/articles/PMC8660645/ /pubmed/34950807 http://dx.doi.org/10.1016/j.coisb.2021.100355 Text en © 2021 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Glauche, Ingmar
Marr, Carsten
Mechanistic models of blood cell fate decisions in the era of single-cell data
title Mechanistic models of blood cell fate decisions in the era of single-cell data
title_full Mechanistic models of blood cell fate decisions in the era of single-cell data
title_fullStr Mechanistic models of blood cell fate decisions in the era of single-cell data
title_full_unstemmed Mechanistic models of blood cell fate decisions in the era of single-cell data
title_short Mechanistic models of blood cell fate decisions in the era of single-cell data
title_sort mechanistic models of blood cell fate decisions in the era of single-cell data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8660645/
https://www.ncbi.nlm.nih.gov/pubmed/34950807
http://dx.doi.org/10.1016/j.coisb.2021.100355
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