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Scale-Free Spanning Trees and Their Application in Genomic Epidemiology

We study the algorithmic problem of finding the most “scale-free-like” spanning tree of a connected graph. This problem is motivated by the fundamental problem of genomic epidemiology: given viral genomes sampled from infected individuals, reconstruct the transmission network (“who infected whom”)....

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Detalles Bibliográficos
Autores principales: Orlovich, Yury, Kukharenko, Kirill, Kaibel, Volker, Skums, Pavel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Mary Ann Liebert, Inc., publishers 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8670573/
https://www.ncbi.nlm.nih.gov/pubmed/34491104
http://dx.doi.org/10.1089/cmb.2020.0500