Chronos: a cell population dynamics model of CRISPR experiments that improves inference of gene fitness effects

CRISPR loss of function screens are powerful tools to interrogate biology but exhibit a number of biases and artifacts that can confound the results. Here, we introduce Chronos, an algorithm for inferring gene knockout fitness effects based on an explicit model of cell proliferation dynamics after C...

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Detalles Bibliográficos
Autores principales: Dempster, Joshua M., Boyle, Isabella, Vazquez, Francisca, Root, David E., Boehm, Jesse S., Hahn, William C., Tsherniak, Aviad, McFarland, James M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Method
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8686573/
https://www.ncbi.nlm.nih.gov/pubmed/34930405
http://dx.doi.org/10.1186/s13059-021-02540-7

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8686573/
https://www.ncbi.nlm.nih.gov/pubmed/34930405
http://dx.doi.org/10.1186/s13059-021-02540-7

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