Cargando…
RLM: fast and simplified extraction of read-level methylation metrics from bisulfite sequencing data
SUMMARY: Bisulfite sequencing data provide value beyond the straightforward methylation assessment by analyzing single-read patterns. Over the past years, various metrics have been established to explore this layer of information. However, limited compatibility with alignment tools, reference genome...
Autores principales: | Hetzel, Sara, Giesselmann, Pay, Reinert, Knut, Meissner, Alexander, Kretzmer, Helene |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8686677/ https://www.ncbi.nlm.nih.gov/pubmed/34601556 http://dx.doi.org/10.1093/bioinformatics/btab663 |
Ejemplares similares
-
Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications
por: Krueger, Felix, et al.
Publicado: (2011) -
SAMBLASTER: fast duplicate marking and structural variant read extraction
por: Faust, Gregory G., et al.
Publicado: (2014) -
BS-SNPer: SNP calling in bisulfite-seq data
por: Gao, Shengjie, et al.
Publicado: (2015) -
Bathometer: lightning fast depth-of-reads query
por: Stenzel, U, et al.
Publicado: (2021) -
metilene: fast and sensitive calling of differentially methylated regions from bisulfite sequencing data
por: Jühling, Frank, et al.
Publicado: (2016)