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Sequence-specific minimizers via polar sets

MOTIVATION: Minimizers are efficient methods to sample k-mers from genomic sequences that unconditionally preserve sufficiently long matches between sequences. Well-established methods to construct efficient minimizers focus on sampling fewer k-mers on a random sequence and use universal hitting set...

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Detalles Bibliográficos
Autores principales: Zheng, Hongyu, Kingsford, Carl, Marçais, Guillaume
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8686682/
https://www.ncbi.nlm.nih.gov/pubmed/34252928
http://dx.doi.org/10.1093/bioinformatics/btab313