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A Mathematical Model to Characterize the Role of Light Adaptation in Mammalian Circadian Clock
In response to a light stimulus, the mammalian circadian clock first dramatically increases the expression of Per1 mRNA, and then drops to a baseline even when light persists. This phenomenon is known as light adaptation, which has been experimentally proven to be related to the CRTC1-SIK1 pathway i...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8691188/ https://www.ncbi.nlm.nih.gov/pubmed/34950699 http://dx.doi.org/10.3389/fmolb.2021.681696 |
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author | Shi, Yuzeng Liu, Yu Yang, Ling Yan, Jie |
author_facet | Shi, Yuzeng Liu, Yu Yang, Ling Yan, Jie |
author_sort | Shi, Yuzeng |
collection | PubMed |
description | In response to a light stimulus, the mammalian circadian clock first dramatically increases the expression of Per1 mRNA, and then drops to a baseline even when light persists. This phenomenon is known as light adaptation, which has been experimentally proven to be related to the CRTC1-SIK1 pathway in suprachiasmatic nucleus (SCN). However, the role of this light adaptation in the circadian rhythm remains to be elucidated. To reveal the in-depth function of light adaptation and the underlying dynamics, we proposed a mathematical model for the CRTC1-SIK1 network and coupled it to a mammalian circadian model. The simulation result proved that the light adaptation is achieved by the self-inhibition of the CRTC1/CREB complex. Also, consistently with experimental observations, this adaptation mechanism can limit the phase response to short-term light stimulus, and it also restricts the rate of the phase shift in a jet lag protocol to avoid overly rapid re-entrainment. More importantly, this light adaptation is predicted to prevent the singularity behavior in the cell population, which represents the abolishment of circadian rhythmicity due to desynchronization of oscillating cells. Furthermore, it has been shown to provide refractoriness to successive stimuli with short gap. Therefore, we concluded that the light adaptation generated by the CRTC1-SIK1 pathway in the SCN provides a robust mechanism, allowing the circadian system to maintain homeostasis in the presence of light perturbations. These results not only give new insights into the dynamics of light adaptation from a computational perspective but also lead us to formulate hypotheses about the related physiological significance. |
format | Online Article Text |
id | pubmed-8691188 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-86911882021-12-22 A Mathematical Model to Characterize the Role of Light Adaptation in Mammalian Circadian Clock Shi, Yuzeng Liu, Yu Yang, Ling Yan, Jie Front Mol Biosci Molecular Biosciences In response to a light stimulus, the mammalian circadian clock first dramatically increases the expression of Per1 mRNA, and then drops to a baseline even when light persists. This phenomenon is known as light adaptation, which has been experimentally proven to be related to the CRTC1-SIK1 pathway in suprachiasmatic nucleus (SCN). However, the role of this light adaptation in the circadian rhythm remains to be elucidated. To reveal the in-depth function of light adaptation and the underlying dynamics, we proposed a mathematical model for the CRTC1-SIK1 network and coupled it to a mammalian circadian model. The simulation result proved that the light adaptation is achieved by the self-inhibition of the CRTC1/CREB complex. Also, consistently with experimental observations, this adaptation mechanism can limit the phase response to short-term light stimulus, and it also restricts the rate of the phase shift in a jet lag protocol to avoid overly rapid re-entrainment. More importantly, this light adaptation is predicted to prevent the singularity behavior in the cell population, which represents the abolishment of circadian rhythmicity due to desynchronization of oscillating cells. Furthermore, it has been shown to provide refractoriness to successive stimuli with short gap. Therefore, we concluded that the light adaptation generated by the CRTC1-SIK1 pathway in the SCN provides a robust mechanism, allowing the circadian system to maintain homeostasis in the presence of light perturbations. These results not only give new insights into the dynamics of light adaptation from a computational perspective but also lead us to formulate hypotheses about the related physiological significance. Frontiers Media S.A. 2021-12-07 /pmc/articles/PMC8691188/ /pubmed/34950699 http://dx.doi.org/10.3389/fmolb.2021.681696 Text en Copyright © 2021 Shi, Liu, Yang and Yan. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Molecular Biosciences Shi, Yuzeng Liu, Yu Yang, Ling Yan, Jie A Mathematical Model to Characterize the Role of Light Adaptation in Mammalian Circadian Clock |
title | A Mathematical Model to Characterize the Role of Light Adaptation in Mammalian Circadian Clock |
title_full | A Mathematical Model to Characterize the Role of Light Adaptation in Mammalian Circadian Clock |
title_fullStr | A Mathematical Model to Characterize the Role of Light Adaptation in Mammalian Circadian Clock |
title_full_unstemmed | A Mathematical Model to Characterize the Role of Light Adaptation in Mammalian Circadian Clock |
title_short | A Mathematical Model to Characterize the Role of Light Adaptation in Mammalian Circadian Clock |
title_sort | mathematical model to characterize the role of light adaptation in mammalian circadian clock |
topic | Molecular Biosciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8691188/ https://www.ncbi.nlm.nih.gov/pubmed/34950699 http://dx.doi.org/10.3389/fmolb.2021.681696 |
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