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A case for glycerol as an acceptable additive for single-particle cryoEM samples
Buffer-composition and sample-preparation guidelines for cryo-electron microscopy are geared towards maximizing imaging contrast and reducing electron-beam-induced motion. These pursuits often involve the minimization or the complete removal of additives that are commonly used to facilitate proper p...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8725161/ https://www.ncbi.nlm.nih.gov/pubmed/34981768 http://dx.doi.org/10.1107/S2059798321012110 |
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author | Basanta, Benjamin Hirschi, Marscha M. Grotjahn, Danielle A. Lander, Gabriel C. |
author_facet | Basanta, Benjamin Hirschi, Marscha M. Grotjahn, Danielle A. Lander, Gabriel C. |
author_sort | Basanta, Benjamin |
collection | PubMed |
description | Buffer-composition and sample-preparation guidelines for cryo-electron microscopy are geared towards maximizing imaging contrast and reducing electron-beam-induced motion. These pursuits often involve the minimization or the complete removal of additives that are commonly used to facilitate proper protein folding and minimize aggregation. Among these admonished additives is glycerol, a widely used osmolyte that aids protein stability. In this work, it is shown that the inclusion of glycerol does not preclude high-resolution structure determination by cryoEM, as demonstrated by an ∼2.3 Å resolution reconstruction of mouse apoferritin (∼500 kDa) and an ∼3.3 Å resolution reconstruction of rabbit muscle aldolase (∼160 kDa) in the presence of 20%(v/v) glycerol. While it was found that generating thin ice that is amenable to high-resolution imaging requires long blot times, the addition of glycerol did not result in increased beam-induced motion or an inability to pick particles. Overall, these findings indicate that glycerol should not be discounted as a cryoEM sample-buffer additive, particularly for large, fragile complexes that are prone to disassembly or aggregation upon its removal. |
format | Online Article Text |
id | pubmed-8725161 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-87251612022-01-06 A case for glycerol as an acceptable additive for single-particle cryoEM samples Basanta, Benjamin Hirschi, Marscha M. Grotjahn, Danielle A. Lander, Gabriel C. Acta Crystallogr D Struct Biol Research Papers Buffer-composition and sample-preparation guidelines for cryo-electron microscopy are geared towards maximizing imaging contrast and reducing electron-beam-induced motion. These pursuits often involve the minimization or the complete removal of additives that are commonly used to facilitate proper protein folding and minimize aggregation. Among these admonished additives is glycerol, a widely used osmolyte that aids protein stability. In this work, it is shown that the inclusion of glycerol does not preclude high-resolution structure determination by cryoEM, as demonstrated by an ∼2.3 Å resolution reconstruction of mouse apoferritin (∼500 kDa) and an ∼3.3 Å resolution reconstruction of rabbit muscle aldolase (∼160 kDa) in the presence of 20%(v/v) glycerol. While it was found that generating thin ice that is amenable to high-resolution imaging requires long blot times, the addition of glycerol did not result in increased beam-induced motion or an inability to pick particles. Overall, these findings indicate that glycerol should not be discounted as a cryoEM sample-buffer additive, particularly for large, fragile complexes that are prone to disassembly or aggregation upon its removal. International Union of Crystallography 2022-01-01 /pmc/articles/PMC8725161/ /pubmed/34981768 http://dx.doi.org/10.1107/S2059798321012110 Text en © Benjamin Basanta et al. 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Papers Basanta, Benjamin Hirschi, Marscha M. Grotjahn, Danielle A. Lander, Gabriel C. A case for glycerol as an acceptable additive for single-particle cryoEM samples |
title | A case for glycerol as an acceptable additive for single-particle cryoEM samples |
title_full | A case for glycerol as an acceptable additive for single-particle cryoEM samples |
title_fullStr | A case for glycerol as an acceptable additive for single-particle cryoEM samples |
title_full_unstemmed | A case for glycerol as an acceptable additive for single-particle cryoEM samples |
title_short | A case for glycerol as an acceptable additive for single-particle cryoEM samples |
title_sort | case for glycerol as an acceptable additive for single-particle cryoem samples |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8725161/ https://www.ncbi.nlm.nih.gov/pubmed/34981768 http://dx.doi.org/10.1107/S2059798321012110 |
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