Cargando…

A case for glycerol as an acceptable additive for single-particle cryoEM samples

Buffer-composition and sample-preparation guidelines for cryo-electron microscopy are geared towards maximizing imaging contrast and reducing electron-beam-induced motion. These pursuits often involve the minimization or the complete removal of additives that are commonly used to facilitate proper p...

Descripción completa

Detalles Bibliográficos
Autores principales: Basanta, Benjamin, Hirschi, Marscha M., Grotjahn, Danielle A., Lander, Gabriel C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8725161/
https://www.ncbi.nlm.nih.gov/pubmed/34981768
http://dx.doi.org/10.1107/S2059798321012110
_version_ 1784626060325814272
author Basanta, Benjamin
Hirschi, Marscha M.
Grotjahn, Danielle A.
Lander, Gabriel C.
author_facet Basanta, Benjamin
Hirschi, Marscha M.
Grotjahn, Danielle A.
Lander, Gabriel C.
author_sort Basanta, Benjamin
collection PubMed
description Buffer-composition and sample-preparation guidelines for cryo-electron microscopy are geared towards maximizing imaging contrast and reducing electron-beam-induced motion. These pursuits often involve the minimization or the complete removal of additives that are commonly used to facilitate proper protein folding and minimize aggregation. Among these admonished additives is glycerol, a widely used osmolyte that aids protein stability. In this work, it is shown that the inclusion of glycerol does not preclude high-resolution structure determination by cryoEM, as demonstrated by an ∼2.3 Å resolution reconstruction of mouse apoferritin (∼500 kDa) and an ∼3.3 Å resolution reconstruction of rabbit muscle aldolase (∼160 kDa) in the presence of 20%(v/v) glycerol. While it was found that generating thin ice that is amenable to high-resolution imaging requires long blot times, the addition of glycerol did not result in increased beam-induced motion or an inability to pick particles. Overall, these findings indicate that glycerol should not be discounted as a cryoEM sample-buffer additive, particularly for large, fragile complexes that are prone to disassembly or aggregation upon its removal.
format Online
Article
Text
id pubmed-8725161
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher International Union of Crystallography
record_format MEDLINE/PubMed
spelling pubmed-87251612022-01-06 A case for glycerol as an acceptable additive for single-particle cryoEM samples Basanta, Benjamin Hirschi, Marscha M. Grotjahn, Danielle A. Lander, Gabriel C. Acta Crystallogr D Struct Biol Research Papers Buffer-composition and sample-preparation guidelines for cryo-electron microscopy are geared towards maximizing imaging contrast and reducing electron-beam-induced motion. These pursuits often involve the minimization or the complete removal of additives that are commonly used to facilitate proper protein folding and minimize aggregation. Among these admonished additives is glycerol, a widely used osmolyte that aids protein stability. In this work, it is shown that the inclusion of glycerol does not preclude high-resolution structure determination by cryoEM, as demonstrated by an ∼2.3 Å resolution reconstruction of mouse apoferritin (∼500 kDa) and an ∼3.3 Å resolution reconstruction of rabbit muscle aldolase (∼160 kDa) in the presence of 20%(v/v) glycerol. While it was found that generating thin ice that is amenable to high-resolution imaging requires long blot times, the addition of glycerol did not result in increased beam-induced motion or an inability to pick particles. Overall, these findings indicate that glycerol should not be discounted as a cryoEM sample-buffer additive, particularly for large, fragile complexes that are prone to disassembly or aggregation upon its removal. International Union of Crystallography 2022-01-01 /pmc/articles/PMC8725161/ /pubmed/34981768 http://dx.doi.org/10.1107/S2059798321012110 Text en © Benjamin Basanta et al. 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Basanta, Benjamin
Hirschi, Marscha M.
Grotjahn, Danielle A.
Lander, Gabriel C.
A case for glycerol as an acceptable additive for single-particle cryoEM samples
title A case for glycerol as an acceptable additive for single-particle cryoEM samples
title_full A case for glycerol as an acceptable additive for single-particle cryoEM samples
title_fullStr A case for glycerol as an acceptable additive for single-particle cryoEM samples
title_full_unstemmed A case for glycerol as an acceptable additive for single-particle cryoEM samples
title_short A case for glycerol as an acceptable additive for single-particle cryoEM samples
title_sort case for glycerol as an acceptable additive for single-particle cryoem samples
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8725161/
https://www.ncbi.nlm.nih.gov/pubmed/34981768
http://dx.doi.org/10.1107/S2059798321012110
work_keys_str_mv AT basantabenjamin acaseforglycerolasanacceptableadditiveforsingleparticlecryoemsamples
AT hirschimarscham acaseforglycerolasanacceptableadditiveforsingleparticlecryoemsamples
AT grotjahndaniellea acaseforglycerolasanacceptableadditiveforsingleparticlecryoemsamples
AT landergabrielc acaseforglycerolasanacceptableadditiveforsingleparticlecryoemsamples
AT basantabenjamin caseforglycerolasanacceptableadditiveforsingleparticlecryoemsamples
AT hirschimarscham caseforglycerolasanacceptableadditiveforsingleparticlecryoemsamples
AT grotjahndaniellea caseforglycerolasanacceptableadditiveforsingleparticlecryoemsamples
AT landergabrielc caseforglycerolasanacceptableadditiveforsingleparticlecryoemsamples