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Computational Study of Mechanism and Enantioselectivity of Imine Reductase from Amycolatopsis orientalis

Imine reductases (IREDs) are NADPH‐dependent enzymes (NADPH=nicotinamide adenine dinucleotide phosphate) that catalyze the reduction of imines to amines. They exhibit high enantioselectivity for a broad range of substrates, making them of interest for biocatalytic applications. In this work, we have...

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Detalles Bibliográficos
Autores principales: Prejanò, Mario, Sheng, Xiang, Himo, Fahmi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8734122/
https://www.ncbi.nlm.nih.gov/pubmed/34825518
http://dx.doi.org/10.1002/open.202100250
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author Prejanò, Mario
Sheng, Xiang
Himo, Fahmi
author_facet Prejanò, Mario
Sheng, Xiang
Himo, Fahmi
author_sort Prejanò, Mario
collection PubMed
description Imine reductases (IREDs) are NADPH‐dependent enzymes (NADPH=nicotinamide adenine dinucleotide phosphate) that catalyze the reduction of imines to amines. They exhibit high enantioselectivity for a broad range of substrates, making them of interest for biocatalytic applications. In this work, we have employed density functional theory (DFT) calculations to elucidate the reaction mechanism and the origins of enantioselectivity of IRED from Amycolatopsis orientalis. Two substrates are considered, namely 1‐methyl‐3,4‐dihydroisoquinoline and 2‐propyl‐piperideine. A model of the active site is built on the basis of the available crystal structure. For both substrates, different binding modes are first evaluated, followed by calculation of the hydride transfer transition states from each complex. We have also investigated the effect of mutations of certain important active site residues (Tyr179Ala and Asn241Ala) on the enantioselectivity. The calculated energies are consistent with the experimental observations and the analysis of transition states geometries provides insights into the origins of enantioselectivity of this enzyme.
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spelling pubmed-87341222022-01-11 Computational Study of Mechanism and Enantioselectivity of Imine Reductase from Amycolatopsis orientalis Prejanò, Mario Sheng, Xiang Himo, Fahmi ChemistryOpen Research Articles Imine reductases (IREDs) are NADPH‐dependent enzymes (NADPH=nicotinamide adenine dinucleotide phosphate) that catalyze the reduction of imines to amines. They exhibit high enantioselectivity for a broad range of substrates, making them of interest for biocatalytic applications. In this work, we have employed density functional theory (DFT) calculations to elucidate the reaction mechanism and the origins of enantioselectivity of IRED from Amycolatopsis orientalis. Two substrates are considered, namely 1‐methyl‐3,4‐dihydroisoquinoline and 2‐propyl‐piperideine. A model of the active site is built on the basis of the available crystal structure. For both substrates, different binding modes are first evaluated, followed by calculation of the hydride transfer transition states from each complex. We have also investigated the effect of mutations of certain important active site residues (Tyr179Ala and Asn241Ala) on the enantioselectivity. The calculated energies are consistent with the experimental observations and the analysis of transition states geometries provides insights into the origins of enantioselectivity of this enzyme. John Wiley and Sons Inc. 2021-11-25 /pmc/articles/PMC8734122/ /pubmed/34825518 http://dx.doi.org/10.1002/open.202100250 Text en © 2021 The Authors. Published by Wiley-VCH GmbH https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Research Articles
Prejanò, Mario
Sheng, Xiang
Himo, Fahmi
Computational Study of Mechanism and Enantioselectivity of Imine Reductase from Amycolatopsis orientalis
title Computational Study of Mechanism and Enantioselectivity of Imine Reductase from Amycolatopsis orientalis
title_full Computational Study of Mechanism and Enantioselectivity of Imine Reductase from Amycolatopsis orientalis
title_fullStr Computational Study of Mechanism and Enantioselectivity of Imine Reductase from Amycolatopsis orientalis
title_full_unstemmed Computational Study of Mechanism and Enantioselectivity of Imine Reductase from Amycolatopsis orientalis
title_short Computational Study of Mechanism and Enantioselectivity of Imine Reductase from Amycolatopsis orientalis
title_sort computational study of mechanism and enantioselectivity of imine reductase from amycolatopsis orientalis
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8734122/
https://www.ncbi.nlm.nih.gov/pubmed/34825518
http://dx.doi.org/10.1002/open.202100250
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