Benchmarking atlas-level data integration in single-cell genomics

Single-cell atlases often include samples that span locations, laboratories and conditions, leading to complex, nested batch effects in data. Thus, joint analysis of atlas datasets requires reliable data integration. To guide integration method choice, we benchmarked 68 method and preprocessing comb...

Descripción completa

Detalles Bibliográficos
Autores principales: Luecken, Malte D., Büttner, M., Chaichoompu, K., Danese, A., Interlandi, M., Mueller, M. F., Strobl, D. C., Zappia, L., Dugas, M., Colomé-Tatché, M., Theis, Fabian J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group US 2021
Materias:
Analysis
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8748196/
https://www.ncbi.nlm.nih.gov/pubmed/34949812
http://dx.doi.org/10.1038/s41592-021-01336-8

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8748196/
https://www.ncbi.nlm.nih.gov/pubmed/34949812
http://dx.doi.org/10.1038/s41592-021-01336-8

Ejemplares similares