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Borrowing of information across patient subgroups in a basket trial based on distributional discrepancy

Basket trials have emerged as a new class of efficient approaches in oncology to evaluate a new treatment in several patient subgroups simultaneously. In this article, we extend the key ideas to disease areas outside of oncology, developing a robust Bayesian methodology for randomized, placebo-contr...

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Detalles Bibliográficos
Autores principales: Zheng, Haiyan, Wason, James M S
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8759447/
https://www.ncbi.nlm.nih.gov/pubmed/32380518
http://dx.doi.org/10.1093/biostatistics/kxaa019
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author Zheng, Haiyan
Wason, James M S
author_facet Zheng, Haiyan
Wason, James M S
author_sort Zheng, Haiyan
collection PubMed
description Basket trials have emerged as a new class of efficient approaches in oncology to evaluate a new treatment in several patient subgroups simultaneously. In this article, we extend the key ideas to disease areas outside of oncology, developing a robust Bayesian methodology for randomized, placebo-controlled basket trials with a continuous endpoint to enable borrowing of information across subtrials with similar treatment effects. After adjusting for covariates, information from a complementary subtrial can be represented into a commensurate prior for the parameter that underpins the subtrial under consideration. We propose using distributional discrepancy to characterize the commensurability between subtrials for appropriate borrowing of information through a spike-and-slab prior, which is placed on the prior precision factor. When the basket trial has at least three subtrials, commensurate priors for point-to-point borrowing are combined into a marginal predictive prior, according to the weights transformed from the pairwise discrepancy measures. In this way, only information from subtrial(s) with the most commensurate treatment effect is leveraged. The marginal predictive prior is updated to a robust posterior by the contemporary subtrial data to inform decision making. Operating characteristics of the proposed methodology are evaluated through simulations motivated by a real basket trial in chronic diseases. The proposed methodology has advantages compared to other selected Bayesian analysis models, for (i) identifying the most commensurate source of information and (ii) gauging the degree of borrowing from specific subtrials. Numerical results also suggest that our methodology can improve the precision of estimates and, potentially, the statistical power for hypothesis testing.
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spelling pubmed-87594472022-01-18 Borrowing of information across patient subgroups in a basket trial based on distributional discrepancy Zheng, Haiyan Wason, James M S Biostatistics Articles Basket trials have emerged as a new class of efficient approaches in oncology to evaluate a new treatment in several patient subgroups simultaneously. In this article, we extend the key ideas to disease areas outside of oncology, developing a robust Bayesian methodology for randomized, placebo-controlled basket trials with a continuous endpoint to enable borrowing of information across subtrials with similar treatment effects. After adjusting for covariates, information from a complementary subtrial can be represented into a commensurate prior for the parameter that underpins the subtrial under consideration. We propose using distributional discrepancy to characterize the commensurability between subtrials for appropriate borrowing of information through a spike-and-slab prior, which is placed on the prior precision factor. When the basket trial has at least three subtrials, commensurate priors for point-to-point borrowing are combined into a marginal predictive prior, according to the weights transformed from the pairwise discrepancy measures. In this way, only information from subtrial(s) with the most commensurate treatment effect is leveraged. The marginal predictive prior is updated to a robust posterior by the contemporary subtrial data to inform decision making. Operating characteristics of the proposed methodology are evaluated through simulations motivated by a real basket trial in chronic diseases. The proposed methodology has advantages compared to other selected Bayesian analysis models, for (i) identifying the most commensurate source of information and (ii) gauging the degree of borrowing from specific subtrials. Numerical results also suggest that our methodology can improve the precision of estimates and, potentially, the statistical power for hypothesis testing. Oxford University Press 2020-05-07 /pmc/articles/PMC8759447/ /pubmed/32380518 http://dx.doi.org/10.1093/biostatistics/kxaa019 Text en © The Author 2020. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Zheng, Haiyan
Wason, James M S
Borrowing of information across patient subgroups in a basket trial based on distributional discrepancy
title Borrowing of information across patient subgroups in a basket trial based on distributional discrepancy
title_full Borrowing of information across patient subgroups in a basket trial based on distributional discrepancy
title_fullStr Borrowing of information across patient subgroups in a basket trial based on distributional discrepancy
title_full_unstemmed Borrowing of information across patient subgroups in a basket trial based on distributional discrepancy
title_short Borrowing of information across patient subgroups in a basket trial based on distributional discrepancy
title_sort borrowing of information across patient subgroups in a basket trial based on distributional discrepancy
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8759447/
https://www.ncbi.nlm.nih.gov/pubmed/32380518
http://dx.doi.org/10.1093/biostatistics/kxaa019
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