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A simplified protocol for performing MAGMA/H-MAGMA gene set analysis utilizing high-performance computing environments

Here, we present a quick-start protocol to perform generalized gene-set analysis of GWAS data on a metaset of gene lists generated by upstream pipelines, such as differential expression analysis, using the Multi-marker Analysis of GenoMic Annotation (MAGMA) software package and Hi-C coupled H-MAGMA...

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Detalles Bibliográficos
Autor principal: Zhang, Siwei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8761752/
https://www.ncbi.nlm.nih.gov/pubmed/35072112
http://dx.doi.org/10.1016/j.xpro.2021.101083