Cargando…

Comparison of mitochondrial DNA sequences from whole blood and lymphoblastoid cell lines

Lymphoblastoid cell lines (LCLs) provide an unlimited source of genomic DNA for genetic studies. Here, we compared mtDNA sequence variants, heteroplasmic or homplasmic, between LCL (sequenced by mitoRCA-seq method) and whole blood samples (sequenced through whole genome sequencing approach) of the s...

Descripción completa

Detalles Bibliográficos
Autores principales:	Liu, Chunyu, Fetterman, Jessica L., Sun, Xianbang, Yan, Kaiyu, Liu, Poching, Luo, Yan, Ding, Jun, Zhu, Jun, Levy, Daniel
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8810874/ https://www.ncbi.nlm.nih.gov/pubmed/35110616 http://dx.doi.org/10.1038/s41598-022-05814-7

Ejemplares similares

In depth comparison of an individual’s DNA and its lymphoblastoid cell line using whole genome sequencing
por: Nickles, Dorothee, et al.
Publicado: (2012)

Lymphoblastoid Cell Lines as Models to Study Mitochondrial Function in Neurological Disorders
por: Annesley, Sarah Jane, et al.
Publicado: (2021)

A bioinformatics pipeline for estimating mitochondrial DNA copy number and heteroplasmy levels from whole genome sequencing data
por: Battle, Stephanie L, et al.
Publicado: (2022)

Patient-derived lymphoblastoid cell lines harboring mitochondrial DNA mutations as tool for small molecule drug discovery
por: Chin, Randall Marcelo, et al.
Publicado: (2018)

Variability of gene expression profiles in human blood and lymphoblastoid cell lines
por: Min, Josine L, et al.
Publicado: (2010)

Differences between the genomes of lymphoblastoid cell lines and blood-derived samples
por: Joesch-Cohen, Lena M, et al.
Publicado: (2017)

Characterization of the microDNA through the response to chemotherapeutics in lymphoblastoid cell lines
por: Mehanna, Pamela, et al.
Publicado: (2017)

Whole Genome DNA and RNA Sequencing of Whole Blood Elucidates the Genetic Architecture of Gene Expression Underlying a Wide Range of Diseases
por: Liu, Chunyu, et al.
Publicado: (2022)

Whole Genome DNA and RNA Sequencing of Whole Blood Elucidates the Genetic Architecture of Gene Expression Underlying a Wide Range of Diseases
por: Liu, Chunyu, et al.
Publicado: (2022)

Whole genome DNA and RNA sequencing of whole blood elucidates the genetic architecture of gene expression underlying a wide range of diseases
por: Liu, Chunyu, et al.
Publicado: (2022)

Oxidative stress induces mitochondrial dysfunction in a subset of autistic lymphoblastoid cell lines
por: Rose, S, et al.
Publicado: (2014)

The landscape of somatic mutations in lymphoblastoid cell lines
por: Caballero, Madison, et al.
Publicado: (2023)

The landscape of somatic mutations in lymphoblastoid cell lines
por: Caballero, Madison, et al.
Publicado: (2023)

Increased Susceptibility to Ethylmercury-Induced Mitochondrial Dysfunction in a Subset of Autism Lymphoblastoid Cell Lines
por: Rose, Shannon, et al.
Publicado: (2015)

Instability at Short Tandem Repeats in Lymphoblastoid Cell Lines
por: Lee, Jae-Eun, et al.
Publicado: (2013)

Limitations of lymphoblastoid cell lines for functional analysis of SNPs
por: Pathak, Hansi, et al.
Publicado: (2017)

Single-cell RNA sequencing of a European and an African lymphoblastoid cell line
por: Osorio, Daniel, et al.
Publicado: (2019)

Proceedings: Cultured lymphoblastoid lines as a model for leukaemia/lymphoma.
por: Steel, C. M.
Publicado: (1975)

The ultrastructure of lymphoblastoid cell lines from Marek's disease lymphomata.
por: Frazier, J. A., et al.
Publicado: (1975)

Growth properties and alloantigenic expression of murine lymphoblastoid cell lines
Publicado: (1975)

The Viral and Cellular MicroRNA Targetome in Lymphoblastoid Cell Lines
por: Skalsky, Rebecca L., et al.
Publicado: (2012)

Genetic and genomic stability across lymphoblastoid cell line expansions
por: Scheinfeldt, Laura B., et al.
Publicado: (2018)

Proteomic analysis of lymphoblastoid cell lines from schizophrenic patients
por: Yoshimi, Akira, et al.
Publicado: (2019)

Cultivation of avian rotaviruses in chicken lymphocytes and lymphoblastoid cell lines
por: Schat, K. A., et al.
Publicado: (1987)

Characterizing asparagine synthetase deficiency variants in lymphoblastoid cell lines
por: Staklinski, Stephen J., et al.
Publicado: (2023)

Mitochondrial Dysfunction Is Inducible in Lymphoblastoid Cell Lines From Children With Autism and May Involve the TORC1 Pathway
por: Bennuri, Sirish C., et al.
Publicado: (2019)

Comprehensive Cis-Regulation Analysis of Genetic Variants in Human Lymphoblastoid Cell Lines
por: Wang, Ying, et al.
Publicado: (2019)

Lymphoblastoid Cell lines: a Continuous in Vitro Source of Cells to Study Carcinogen Sensitivity and DNA Repair
por: Hussain, Tabish, et al.
Publicado: (2012)

Modeling neurological diseases with induced pluripotent cells reprogrammed from immortalized lymphoblastoid cell lines
por: Fujimori, Koki, et al.
Publicado: (2016)

Cytoplasmic receptor levels and glucocorticoid response in human lymphoblastoid cell lines.
por: Bird, C. C., et al.
Publicado: (1975)

Effect of methylprednisolone on the nucleoside metabolism of a human lymphoblastoid cell line.
por: Waddell, A. W., et al.
Publicado: (1977)

Establishment of Epstein-Barr Virus Growth-transformed Lymphoblastoid Cell Lines
por: Hui-Yuen, Joyce, et al.
Publicado: (2011)

Molecular insight into thiopurine resistance: transcriptomic signature in lymphoblastoid cell lines
por: Chouchana, Laurent, et al.
Publicado: (2015)

Transcriptomic variation of pharmacogenes in multiple human tissues and lymphoblastoid cell lines
por: Chhibber, A, et al.
Publicado: (2017)

Utility of Lymphoblastoid Cell Lines for Induced Pluripotent Stem Cell Generation
por: Kumar, Satish, et al.
Publicado: (2016)

The Mighty NUMT: Mitochondrial DNA Flexing Its Code in the Nuclear Genome
por: Xue, Liying, et al.
Publicado: (2023)

The Patterns of Histone Modifications in the Vicinity of Transcription Factor Binding Sites in Human Lymphoblastoid Cell Lines
por: Nie, Yumin, et al.
Publicado: (2013)

A high-throughput real-time PCR tissue-of-origin test to distinguish blood from lymphoblastoid cell line DNA for (epi)genomic studies
por: Hardy, Lise M., et al.
Publicado: (2022)

Mitochondrial and redox abnormalities in autism lymphoblastoid cells: a sibling control study
por: Rose, Shannon, et al.
Publicado: (2017)

Extreme Clonality in Lymphoblastoid Cell Lines with Implications for Allele Specific Expression Analyses
por: Plagnol, Vincent, et al.
Publicado: (2008)

Cannot write session to /tmp/vufind_sessions/sess_8lop74nta89jlrujapbdbptqtc