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Eyes on Lipinski's Rule of Five: A New “Rule of Thumb” for Physicochemical Design Space of Ophthalmic Drugs
The study objective was to investigate molecular thermodynamic properties of approved ophthalmic drugs and derive a framework outlining physicochemical design space for product development. Unlike the methodology used to obtain molecular descriptors for assessment of drug-like properties by Lipinski...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Mary Ann Liebert, Inc., publishers
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8817695/ https://www.ncbi.nlm.nih.gov/pubmed/34905402 http://dx.doi.org/10.1089/jop.2021.0069 |
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author | Karami, Thomas K. Hailu, Shumet Feng, Shaoxin Graham, Richard Gukasyan, Hovhannes J. |
author_facet | Karami, Thomas K. Hailu, Shumet Feng, Shaoxin Graham, Richard Gukasyan, Hovhannes J. |
author_sort | Karami, Thomas K. |
collection | PubMed |
description | The study objective was to investigate molecular thermodynamic properties of approved ophthalmic drugs and derive a framework outlining physicochemical design space for product development. Unlike the methodology used to obtain molecular descriptors for assessment of drug-like properties by Lipinski's Rule of 5 (Ro5), this work presents a retrospective approach based on in silico analysis of molecular thermodynamic properties beyond Ro5 parameters (ie, free energy of distribution/partitioning in octanol/water, dynamic polar surface area, distribution coefficient, and solubility at physiological pH) by using 145 marketed ophthalmic drugs. The study's focus was to delineate inherent molecular parameters explicitly important for ocular permeability and absorption from topical eye drops. A comprehensive parameter distribution analysis on ophthalmic drugs’ molecular properties was performed. Frequencies in distribution analyses provided groundwork for physicochemical parameter limits of molecular thermodynamic properties having impact on corneal permeability and topical ophthalmic drug delivery. These parameters included free energy of partitioning (ΔG(o/w)) calculated based on thermodynamic free energy equation, distribution coefficient at physiological pH (clog D(pH7.4)), topological polar surface area (TPSA), and aqueous solubility (S(int), S(pH7.4)) with boundaries of clog D(pH7.4) ≤4.0, TPSA ≤250 Å(2), ΔG(o/w) ≤20 kJ/mol (4.8 kcal/mol), and solubility (S(int) and S(pH7.4)) ≥1 μM, respectively. The theoretical free energy of partitioning model streamlined calculation of changes in the free energy of partitioning, Δ(ΔG(o/w)), as a measure of incremental improvements in corneal permeability for congeneric series. The above parameter limits are proposed as “rules of thumb” for topical ophthalmic drugs to assess risks in developability. |
format | Online Article Text |
id | pubmed-8817695 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Mary Ann Liebert, Inc., publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-88176952022-02-07 Eyes on Lipinski's Rule of Five: A New “Rule of Thumb” for Physicochemical Design Space of Ophthalmic Drugs Karami, Thomas K. Hailu, Shumet Feng, Shaoxin Graham, Richard Gukasyan, Hovhannes J. J Ocul Pharmacol Ther Original Articles The study objective was to investigate molecular thermodynamic properties of approved ophthalmic drugs and derive a framework outlining physicochemical design space for product development. Unlike the methodology used to obtain molecular descriptors for assessment of drug-like properties by Lipinski's Rule of 5 (Ro5), this work presents a retrospective approach based on in silico analysis of molecular thermodynamic properties beyond Ro5 parameters (ie, free energy of distribution/partitioning in octanol/water, dynamic polar surface area, distribution coefficient, and solubility at physiological pH) by using 145 marketed ophthalmic drugs. The study's focus was to delineate inherent molecular parameters explicitly important for ocular permeability and absorption from topical eye drops. A comprehensive parameter distribution analysis on ophthalmic drugs’ molecular properties was performed. Frequencies in distribution analyses provided groundwork for physicochemical parameter limits of molecular thermodynamic properties having impact on corneal permeability and topical ophthalmic drug delivery. These parameters included free energy of partitioning (ΔG(o/w)) calculated based on thermodynamic free energy equation, distribution coefficient at physiological pH (clog D(pH7.4)), topological polar surface area (TPSA), and aqueous solubility (S(int), S(pH7.4)) with boundaries of clog D(pH7.4) ≤4.0, TPSA ≤250 Å(2), ΔG(o/w) ≤20 kJ/mol (4.8 kcal/mol), and solubility (S(int) and S(pH7.4)) ≥1 μM, respectively. The theoretical free energy of partitioning model streamlined calculation of changes in the free energy of partitioning, Δ(ΔG(o/w)), as a measure of incremental improvements in corneal permeability for congeneric series. The above parameter limits are proposed as “rules of thumb” for topical ophthalmic drugs to assess risks in developability. Mary Ann Liebert, Inc., publishers 2022-01-01 2022-01-28 /pmc/articles/PMC8817695/ /pubmed/34905402 http://dx.doi.org/10.1089/jop.2021.0069 Text en © Thomas K. Karami et al. 2022; Published by Mary Ann Liebert, Inc. https://creativecommons.org/licenses/by/4.0/This Open Access article is distributed under the terms of the Creative Commons License [CC-BY] (http://creativecommons.org/licenses/by/4.0 (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Karami, Thomas K. Hailu, Shumet Feng, Shaoxin Graham, Richard Gukasyan, Hovhannes J. Eyes on Lipinski's Rule of Five: A New “Rule of Thumb” for Physicochemical Design Space of Ophthalmic Drugs |
title | Eyes on Lipinski's Rule of Five: A New “Rule of Thumb” for Physicochemical Design Space of Ophthalmic Drugs |
title_full | Eyes on Lipinski's Rule of Five: A New “Rule of Thumb” for Physicochemical Design Space of Ophthalmic Drugs |
title_fullStr | Eyes on Lipinski's Rule of Five: A New “Rule of Thumb” for Physicochemical Design Space of Ophthalmic Drugs |
title_full_unstemmed | Eyes on Lipinski's Rule of Five: A New “Rule of Thumb” for Physicochemical Design Space of Ophthalmic Drugs |
title_short | Eyes on Lipinski's Rule of Five: A New “Rule of Thumb” for Physicochemical Design Space of Ophthalmic Drugs |
title_sort | eyes on lipinski's rule of five: a new “rule of thumb” for physicochemical design space of ophthalmic drugs |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8817695/ https://www.ncbi.nlm.nih.gov/pubmed/34905402 http://dx.doi.org/10.1089/jop.2021.0069 |
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