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Eyes on Lipinski's Rule of Five: A New “Rule of Thumb” for Physicochemical Design Space of Ophthalmic Drugs

The study objective was to investigate molecular thermodynamic properties of approved ophthalmic drugs and derive a framework outlining physicochemical design space for product development. Unlike the methodology used to obtain molecular descriptors for assessment of drug-like properties by Lipinski...

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Autores principales: Karami, Thomas K., Hailu, Shumet, Feng, Shaoxin, Graham, Richard, Gukasyan, Hovhannes J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Mary Ann Liebert, Inc., publishers 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8817695/
https://www.ncbi.nlm.nih.gov/pubmed/34905402
http://dx.doi.org/10.1089/jop.2021.0069
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author Karami, Thomas K.
Hailu, Shumet
Feng, Shaoxin
Graham, Richard
Gukasyan, Hovhannes J.
author_facet Karami, Thomas K.
Hailu, Shumet
Feng, Shaoxin
Graham, Richard
Gukasyan, Hovhannes J.
author_sort Karami, Thomas K.
collection PubMed
description The study objective was to investigate molecular thermodynamic properties of approved ophthalmic drugs and derive a framework outlining physicochemical design space for product development. Unlike the methodology used to obtain molecular descriptors for assessment of drug-like properties by Lipinski's Rule of 5 (Ro5), this work presents a retrospective approach based on in silico analysis of molecular thermodynamic properties beyond Ro5 parameters (ie, free energy of distribution/partitioning in octanol/water, dynamic polar surface area, distribution coefficient, and solubility at physiological pH) by using 145 marketed ophthalmic drugs. The study's focus was to delineate inherent molecular parameters explicitly important for ocular permeability and absorption from topical eye drops. A comprehensive parameter distribution analysis on ophthalmic drugs’ molecular properties was performed. Frequencies in distribution analyses provided groundwork for physicochemical parameter limits of molecular thermodynamic properties having impact on corneal permeability and topical ophthalmic drug delivery. These parameters included free energy of partitioning (ΔG(o/w)) calculated based on thermodynamic free energy equation, distribution coefficient at physiological pH (clog D(pH7.4)), topological polar surface area (TPSA), and aqueous solubility (S(int), S(pH7.4)) with boundaries of clog D(pH7.4) ≤4.0, TPSA ≤250 Å(2), ΔG(o/w) ≤20 kJ/mol (4.8 kcal/mol), and solubility (S(int) and S(pH7.4)) ≥1 μM, respectively. The theoretical free energy of partitioning model streamlined calculation of changes in the free energy of partitioning, Δ(ΔG(o/w)), as a measure of incremental improvements in corneal permeability for congeneric series. The above parameter limits are proposed as “rules of thumb” for topical ophthalmic drugs to assess risks in developability.
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spelling pubmed-88176952022-02-07 Eyes on Lipinski's Rule of Five: A New “Rule of Thumb” for Physicochemical Design Space of Ophthalmic Drugs Karami, Thomas K. Hailu, Shumet Feng, Shaoxin Graham, Richard Gukasyan, Hovhannes J. J Ocul Pharmacol Ther Original Articles The study objective was to investigate molecular thermodynamic properties of approved ophthalmic drugs and derive a framework outlining physicochemical design space for product development. Unlike the methodology used to obtain molecular descriptors for assessment of drug-like properties by Lipinski's Rule of 5 (Ro5), this work presents a retrospective approach based on in silico analysis of molecular thermodynamic properties beyond Ro5 parameters (ie, free energy of distribution/partitioning in octanol/water, dynamic polar surface area, distribution coefficient, and solubility at physiological pH) by using 145 marketed ophthalmic drugs. The study's focus was to delineate inherent molecular parameters explicitly important for ocular permeability and absorption from topical eye drops. A comprehensive parameter distribution analysis on ophthalmic drugs’ molecular properties was performed. Frequencies in distribution analyses provided groundwork for physicochemical parameter limits of molecular thermodynamic properties having impact on corneal permeability and topical ophthalmic drug delivery. These parameters included free energy of partitioning (ΔG(o/w)) calculated based on thermodynamic free energy equation, distribution coefficient at physiological pH (clog D(pH7.4)), topological polar surface area (TPSA), and aqueous solubility (S(int), S(pH7.4)) with boundaries of clog D(pH7.4) ≤4.0, TPSA ≤250 Å(2), ΔG(o/w) ≤20 kJ/mol (4.8 kcal/mol), and solubility (S(int) and S(pH7.4)) ≥1 μM, respectively. The theoretical free energy of partitioning model streamlined calculation of changes in the free energy of partitioning, Δ(ΔG(o/w)), as a measure of incremental improvements in corneal permeability for congeneric series. The above parameter limits are proposed as “rules of thumb” for topical ophthalmic drugs to assess risks in developability. Mary Ann Liebert, Inc., publishers 2022-01-01 2022-01-28 /pmc/articles/PMC8817695/ /pubmed/34905402 http://dx.doi.org/10.1089/jop.2021.0069 Text en © Thomas K. Karami et al. 2022; Published by Mary Ann Liebert, Inc. https://creativecommons.org/licenses/by/4.0/This Open Access article is distributed under the terms of the Creative Commons License [CC-BY] (http://creativecommons.org/licenses/by/4.0 (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Karami, Thomas K.
Hailu, Shumet
Feng, Shaoxin
Graham, Richard
Gukasyan, Hovhannes J.
Eyes on Lipinski's Rule of Five: A New “Rule of Thumb” for Physicochemical Design Space of Ophthalmic Drugs
title Eyes on Lipinski's Rule of Five: A New “Rule of Thumb” for Physicochemical Design Space of Ophthalmic Drugs
title_full Eyes on Lipinski's Rule of Five: A New “Rule of Thumb” for Physicochemical Design Space of Ophthalmic Drugs
title_fullStr Eyes on Lipinski's Rule of Five: A New “Rule of Thumb” for Physicochemical Design Space of Ophthalmic Drugs
title_full_unstemmed Eyes on Lipinski's Rule of Five: A New “Rule of Thumb” for Physicochemical Design Space of Ophthalmic Drugs
title_short Eyes on Lipinski's Rule of Five: A New “Rule of Thumb” for Physicochemical Design Space of Ophthalmic Drugs
title_sort eyes on lipinski's rule of five: a new “rule of thumb” for physicochemical design space of ophthalmic drugs
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8817695/
https://www.ncbi.nlm.nih.gov/pubmed/34905402
http://dx.doi.org/10.1089/jop.2021.0069
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