Cargando…
Spatial structure governs the mode of tumour evolution
Characterizing the mode—the way, manner or pattern—of evolution in tumours is important for clinical forecasting and optimizing cancer treatment. Sequencing studies have inferred various modes, including branching, punctuated and neutral evolution, but it is unclear why a particular pattern predomin...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8825284/ https://www.ncbi.nlm.nih.gov/pubmed/34949822 http://dx.doi.org/10.1038/s41559-021-01615-9 |
_version_ | 1784647177844293632 |
---|---|
author | Noble, Robert Burri, Dominik Le Sueur, Cécile Lemant, Jeanne Viossat, Yannick Kather, Jakob Nikolas Beerenwinkel, Niko |
author_facet | Noble, Robert Burri, Dominik Le Sueur, Cécile Lemant, Jeanne Viossat, Yannick Kather, Jakob Nikolas Beerenwinkel, Niko |
author_sort | Noble, Robert |
collection | PubMed |
description | Characterizing the mode—the way, manner or pattern—of evolution in tumours is important for clinical forecasting and optimizing cancer treatment. Sequencing studies have inferred various modes, including branching, punctuated and neutral evolution, but it is unclear why a particular pattern predominates in any given tumour. Here we propose that tumour architecture is key to explaining the variety of observed genetic patterns. We examine this hypothesis using spatially explicit population genetics models and demonstrate that, within biologically relevant parameter ranges, different spatial structures can generate four tumour evolutionary modes: rapid clonal expansion, progressive diversification, branching evolution and effectively almost neutral evolution. Quantitative indices for describing and classifying these evolutionary modes are presented. Using these indices, we show that our model predictions are consistent with empirical observations for cancer types with corresponding spatial structures. The manner of cell dispersal and the range of cell–cell interactions are found to be essential factors in accurately characterizing, forecasting and controlling tumour evolution. |
format | Online Article Text |
id | pubmed-8825284 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-88252842022-02-18 Spatial structure governs the mode of tumour evolution Noble, Robert Burri, Dominik Le Sueur, Cécile Lemant, Jeanne Viossat, Yannick Kather, Jakob Nikolas Beerenwinkel, Niko Nat Ecol Evol Article Characterizing the mode—the way, manner or pattern—of evolution in tumours is important for clinical forecasting and optimizing cancer treatment. Sequencing studies have inferred various modes, including branching, punctuated and neutral evolution, but it is unclear why a particular pattern predominates in any given tumour. Here we propose that tumour architecture is key to explaining the variety of observed genetic patterns. We examine this hypothesis using spatially explicit population genetics models and demonstrate that, within biologically relevant parameter ranges, different spatial structures can generate four tumour evolutionary modes: rapid clonal expansion, progressive diversification, branching evolution and effectively almost neutral evolution. Quantitative indices for describing and classifying these evolutionary modes are presented. Using these indices, we show that our model predictions are consistent with empirical observations for cancer types with corresponding spatial structures. The manner of cell dispersal and the range of cell–cell interactions are found to be essential factors in accurately characterizing, forecasting and controlling tumour evolution. Nature Publishing Group UK 2021-12-23 2022 /pmc/articles/PMC8825284/ /pubmed/34949822 http://dx.doi.org/10.1038/s41559-021-01615-9 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Noble, Robert Burri, Dominik Le Sueur, Cécile Lemant, Jeanne Viossat, Yannick Kather, Jakob Nikolas Beerenwinkel, Niko Spatial structure governs the mode of tumour evolution |
title | Spatial structure governs the mode of tumour evolution |
title_full | Spatial structure governs the mode of tumour evolution |
title_fullStr | Spatial structure governs the mode of tumour evolution |
title_full_unstemmed | Spatial structure governs the mode of tumour evolution |
title_short | Spatial structure governs the mode of tumour evolution |
title_sort | spatial structure governs the mode of tumour evolution |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8825284/ https://www.ncbi.nlm.nih.gov/pubmed/34949822 http://dx.doi.org/10.1038/s41559-021-01615-9 |
work_keys_str_mv | AT noblerobert spatialstructuregovernsthemodeoftumourevolution AT burridominik spatialstructuregovernsthemodeoftumourevolution AT lesueurcecile spatialstructuregovernsthemodeoftumourevolution AT lemantjeanne spatialstructuregovernsthemodeoftumourevolution AT viossatyannick spatialstructuregovernsthemodeoftumourevolution AT katherjakobnikolas spatialstructuregovernsthemodeoftumourevolution AT beerenwinkelniko spatialstructuregovernsthemodeoftumourevolution |