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Generation of ENSEMBL-based proteogenomics databases boosts the identification of non-canonical peptides
SUMMARY: We have implemented the pypgatk package and the pgdb workflow to create proteogenomics databases based on ENSEMBL resources. The tools allow the generation of protein sequences from novel protein-coding transcripts by performing a three-frame translation of pseudogenes, lncRNAs and other no...
| Autores principales: | , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Oxford University Press
2021
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8825679/ https://www.ncbi.nlm.nih.gov/pubmed/34904638 http://dx.doi.org/10.1093/bioinformatics/btab838 |