VPF-Class: taxonomic assignment and host prediction of uncultivated viruses based on viral protein families

MOTIVATION: Two key steps in the analysis of uncultured viruses recovered from metagenomes are the taxonomic classification of the viral sequences and the identification of putative host(s). Both steps rely mainly on the assignment of viral proteins to orthologs in cultivated viruses. Viral Protein...

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Detalles Bibliográficos
Autores principales: Pons, Joan Carles, Paez-Espino, David, Riera, Gabriel, Ivanova, Natalia, Kyrpides, Nikos C, Llabrés, Mercè
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Original Papers
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8830756/
https://www.ncbi.nlm.nih.gov/pubmed/33471063
http://dx.doi.org/10.1093/bioinformatics/btab026

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8830756/
https://www.ncbi.nlm.nih.gov/pubmed/33471063
http://dx.doi.org/10.1093/bioinformatics/btab026

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